PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT30661
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family NAC
Protein Properties Length: 371aa    MW: 41060.5 Da    PI: 4.5183
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT30661genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM57.83.9e-181012010128
       NAM  10 tdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrd.kkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfy 109
               +deelv ++L+++ ++++l++ +v+  +d++ ++P+d         + wy   + d + y +g+   r++k gyWk     + + + ++++ g+k +L fy
  EMT30661  10 SDEELV-RFLAERKADDSLPE-NVLVGMDLTLIHPRDSS-----PGNIWYLNQSDDqQPYGNGESDIRKAKGGYWKCIDVLR-IQT-SKSTAGVKFSLEFY 101
               69****.89999999999999.89*************85.....4577887665541457799*************997754.555.6889********** PP

       NAM 110 kgrapkgektdWvmheyrl 128
               +g+ap+g++t+W+mhey++
  EMT30661 102 EGEAPSGKRTQWLMHEYQV 120
               *****************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100522.6931148IPR003441NAC domain
SuperFamilySSF1019411.96E-228128IPR003441NAC domain
PfamPF023659.3E-1010120IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    Send to blast
MNYSISDSWS DEELVRFLAE RKADDSLPEN VLVGMDLTLI HPRDSSPGNI WYLNQSDDQQ  60
PYGNGESDIR KAKGGYWKCI DVLRIQTSKS TAGVKFSLEF YEGEAPSGKR TQWLMHEYQV  120
EQNDDANVPQ GSKKLNTEDE LLSLSTNAPN DHLESYLQYL ADMEEQNVAV NSKIVSSSKQ  180
NSSSREGKDI YEDYSAADGV DFVNALANED YIEMKDLLSS DGSASTSEFS SRRSEEYFDS  240
DALLRELLND QNTTREVHQD CNHNIAGPTK SDCMVISPPE QGFVHNHDNG AMVAGTSLEK  300
AASDSERDQH SSEQCLDHHP PASSCSQNSH VEQSHSNSSG SSHGSTTSPQ RSRSIGKLGK  360
IGKKYCCLGS F
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-121015124171Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020195723.10.0protein ATAF2-like
TrEMBLM8D3140.0M8D314_AEGTA; NAC domain-containing protein 68
STRINGEMT306610.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP109162632
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63790.12e-15NAC domain containing protein 102