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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
EMT29036 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family |
C2H2 |
Protein Properties |
Length: 414aa MW: 43693 Da PI: 4.3068 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
EMT29036 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 13 | 0.0003 | 390 | 413 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23
+ C+ C+++F + s L++H + H
EMT29036 390 HACKSCSRTFGSVSALQSHEKAkH 413
67*****************99877 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009414 | Biological Process | response to water deprivation |
GO:0009651 | Biological Process | response to salt stress |
GO:0009737 | Biological Process | response to abscisic acid |
GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
GO:0005730 | Cellular Component | nucleolus |
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
Protein Sequence Length: 414 aa
Download sequence Send
to blast |
MKFWGVEVKP GQTVYCDPGE GRVVHLTQVA LGEAEKGSVG ILVSAKIGDQ KGAIGTLSAE 60 NHPHIPCDLI FEKQFELSHS SKTASVFACG YKIFVPICES DSSELDSSEF DSSESDSSES 120 DSSEDEVETV NNQVTNRIVG NVVKPPTTKD DKKVTDKPDS GEDDSDFSSD SDDVSVFADD 180 NYADDGYSSL DTDSEEDGTG SEEMDTSSKE EDKDSPKTED GKKAVAETAL KTPASDDTSS 240 KEGSGDEENK NTPKPEDGKK TAAETALKTP ASTASSGPCA LQPEDGEKTV AAETDLKTPA 300 SDDTSNKEDT NDQEDKSTPK PEVGGKRAAE TALETPAPDK KAKIETPSGQ DADDKKTVHV 360 ATPHPAKQAD KAPAGNSKQN LKSKYVGGAH ACKSCSRTFG SVSALQSHEK AKHA
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG670306 | 1e-125 | HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring. |