PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT28257
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family NAC
Protein Properties Length: 381aa    MW: 41304.9 Da    PI: 8.0625
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT28257genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM134.66.9e-42171773128
       NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.......................... 77 
               pGfrFhPt+eel+ +yL + + gkkl++ ++i +++iy+++PwdLp ++k +e+ewyfF++rd+k+ t   + r                           
  EMT28257  17 PGFRFHPTEEELLGFYLSRVALGKKLHF-DIIGTLNIYRHDPWDLPGMAKIGEREWYFFVPRDRKAGTAPPSARGstptssppstftatipgiclrrvatg 116
               9*************************99.99***************888999**************99888888458999********************* PP

       NAM  78 ........tksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       t++g+Wkatg+d+++ s+   ++++glkktLvfy+grap+g+ktdWvm+eyrl
  EMT28257 117 sggartgtTERGFWKATGSDRAIRSTgdPKRVIGLKKTLVFYQGRAPRGTKTDWVMNEYRL 177
               *******999***************8766778***************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.24E-241287IPR003441NAC domain
PROSITE profilePS5100546.36915197IPR003441NAC domain
PfamPF023654.9E-2117177IPR003441NAC domain
SuperFamilySSF1019413.66E-25109197IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    Send to blast
MAMAVAASTM EVDQDLPGFR FHPTEEELLG FYLSRVALGK KLHFDIIGTL NIYRHDPWDL  60
PGMAKIGERE WYFFVPRDRK AGTAPPSARG STPTSSPPST FTATIPGICL RRVATGSGGA  120
RTGTTERGFW KATGSDRAIR STGDPKRVIG LKKTLVFYQG RAPRGTKTDW VMNEYRLPDT  180
GAAPPSEDTV LCKVYRKATP LKELEQRAFE MEEMKQRPGG NGGAARACPV PAAGDFYLSS  240
SDDVQDNFLI PSSSSSSVAL SGNSSSCDAP RVAKKEADIA TVAVASTSSL PHAANAPFRL  300
QLPAVNPPCG LQLPAANHEM PNMCSLQLPA ASQGVLDLPL QLPAATNHGV FDWLQDPFLT  360
QLRSPWQDQH CLSPYAHLLY Y
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A5e-391719919167NO APICAL MERISTEM PROTEIN
1ut4_B5e-391719919167NO APICAL MERISTEM PROTEIN
1ut7_A5e-391719919167NO APICAL MERISTEM PROTEIN
1ut7_B5e-391719919167NO APICAL MERISTEM PROTEIN
3swm_A6e-391719922170NAC domain-containing protein 19
3swm_B6e-391719922170NAC domain-containing protein 19
3swm_C6e-391719922170NAC domain-containing protein 19
3swm_D6e-391719922170NAC domain-containing protein 19
3swp_A6e-391719922170NAC domain-containing protein 19
3swp_B6e-391719922170NAC domain-containing protein 19
3swp_C6e-391719922170NAC domain-containing protein 19
3swp_D6e-391719922170NAC domain-containing protein 19
4dul_A5e-391719919167NAC domain-containing protein 19
4dul_B5e-391719919167NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3673761e-141AK367376.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv2055P15.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020190294.10.0NAC domain-containing protein 72-like
SwissprotQ10S651e-136NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBLM8CLK00.0M8CLK0_AEGTA; Putative NAC domain-containing protein 94
STRINGEMT282570.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP177038105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.19e-70NAC domain containing protein 36
Publications ? help Back to Top
  1. Hong Y,Zhang H,Huang L,Li D,Song F
    Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice.
    Front Plant Sci, 2016. 7: p. 4
    [PMID:26834774]