PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT28228
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family bZIP
Protein Properties Length: 382aa    MW: 40363.5 Da    PI: 9.832
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT28228genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_169.84.3e-22243305163
               XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
               e+e+kre+rkq+NRe+ArrsR+RK+ae+eeL++ v++L+aeN++Lk+e+ +l+k ++kl+ e+
  EMT28228 243 EREVKREKRKQSNRESARRSRLRKQAETEELATQVESLTAENTSLKSEIGKLTKSSEKLRIEN 305
               799*******************************************************98776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077773.8E-28192IPR012900G-box binding protein, multifunctional mosaic region
Gene3DG3DSA:1.20.5.1705.4E-17238302No hitNo description
PfamPF001708.7E-21243305IPR004827Basic-leucine zipper domain
SMARTSM003381.2E-21243307IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.162245308IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.31E-11246301No hitNo description
CDDcd147026.30E-22248296No hitNo description
PROSITE patternPS000360250265IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 382 aa     Download sequence    Send to blast
MAHDEAVAAQ KTGKSGSPPK DQPAPSPYPD WSAMQAYYSS GVMPPAYFAP AMAAGHPPPP  60
YMWGPQHMMP PPFGTPYAMY PHGGAYPHPL VPMMASPLSV EPAKSANSKD KSSNKKLKEI  120
DGSAVSTGSG NSKKTSSSGD YSGEGSSDVN DLKVSGTPRK RSLDGGFDTE ATAAARNKDV  180
VASSPIIRNG AILSNQCFPA PVIKPSVTNV ANSRAIGTPV SPLPGVMGPI HTGISTELSS  240
KDEREVKREK RKQSNRESAR RSRLRKQAET EELATQVESL TAENTSLKSE IGKLTKSSEK  300
LRIENSALVV KLKGTAAPTS AEMPLDKTAV AAPSSSPRVV ENFLSMIDDT SKSGVKNHME  360
HSEPKLRQLL GSSATTDVVA AN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1259265RRSRLRK
2259266RRSRLRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00318DAPTransfer from AT2G46270Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT2254640.0KT225464.1 Triticum aestivum GBF1 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020151704.10.0common plant regulatory factor 1-like
RefseqXP_020151705.10.0common plant regulatory factor 1-like
TrEMBLM8C2F90.0M8C2F9_AEGTA; Common plant regulatory factor 1
STRINGEMT282280.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27763888
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01120.12e-28G-box binding factor 2