PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT28157
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family NAC
Protein Properties Length: 347aa    MW: 37783.7 Da    PI: 7.6922
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT28157genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM137.11.2e-422213812128
       NAM  12 eelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykg 111
               eel+ +yL++++++ ++++  +i++vdiyk++PwdLp+++  ++ ewyfFs+rd+ky++g r+nra+ sgyWkatg+dk+++++ +g+ vg+kk Lvfy+g
  EMT28157  22 EELILHYLRNRAAAAPCPV-PIIADVDIYKFDPWDLPSQAVYGDCEWYFFSPRDRKYPNGIRPNRAAGSGYWKATGTDKPIHDAaTGQGVGVKKALVFYTG 121
               8******************.88***************76667789*************************************9978888************ PP

       NAM 112 rapkgektdWvmheyrl 128
               r pkg+kt W+mheyrl
  EMT28157 122 RPPKGTKTAWIMHEYRL 138
               ***************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100548.13411173IPR003441NAC domain
SuperFamilySSF1019413.27E-5422173IPR003441NAC domain
PfamPF023652.0E-1922138IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    Send to blast
MEISIRKGAG GGDVAAGGVP VEELILHYLR NRAAAAPCPV PIIADVDIYK FDPWDLPSQA  60
VYGDCEWYFF SPRDRKYPNG IRPNRAAGSG YWKATGTDKP IHDAATGQGV GVKKALVFYT  120
GRPPKGTKTA WIMHEYRLAA DPLAAAVNTY KPIKFRNVSM RLDDWVLCRI YKKTGLASPM  180
VPPLADYDHM ADHDDLSSGG AFTNAICRPM IRQQHHQQSL AGRLPTFPSF SELFDDYQFA  240
QILDIDVEHG ATHHLAVHPA LNQLLPVGDS RHVVEPSYYA PSSSSPDASG GSSGKRKAAS  300
PEERATHQPP AKKLNGSCFD APPQSANGWQ AVASVLGGLN DHMLPQF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A2e-602217728169NO APICAL MERISTEM PROTEIN
1ut4_B2e-602217728169NO APICAL MERISTEM PROTEIN
1ut7_A2e-602217728169NO APICAL MERISTEM PROTEIN
1ut7_B2e-602217728169NO APICAL MERISTEM PROTEIN
4dul_A2e-602217728169NAC domain-containing protein 19
4dul_B2e-602217728169NAC domain-containing protein 19
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT7834500.0KT783450.1 Triticum aestivum NAC transcription factor 29 (NAC29) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020160301.10.0NAC transcription factor NAM-B1-like
TrEMBLM8CL870.0M8CL87_AEGTA; NAC domain-containing protein 29
STRINGEMT281570.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP123736123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.12e-63NAC domain containing protein 25