 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
EMT27094 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
|
| Family |
LFY |
| Protein Properties |
Length: 305aa MW: 32823.3 Da PI: 8.3372 |
| Description |
LFY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| EMT27094 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FLO_LFY | 281.7 | 2.5e-86 | 1 | 277 | 1 | 287 |
FLO_LFY 1 mdpea..fsaslfkwd...praaaaapparlleeaavseapleaaaaaaarklreleelfkayGvryltvakiaelGftvstLvdmkdeelddlmkslsei 96
mdp++ ++a+ f+wd p+ pa + + +++ a a++ rele+l+ +yGvr +tva+i+elGft+stL+ m+++eldd++++l+ +
EMT27094 1 MDPNDafLAAHPFRWDlgpPA------PAAVPPPPPPPPP---PPALPPANAPRELEDLVVGYGVRASTVARISELGFTASTLLVMTERELDDMTAALAGL 92
777665346779****44322......2223222222222...2345566779************************************************ PP
FLO_LFY 97 frldllvGeryGikaavraerrrleeeeaekkrrkllsedeetaldalsqeglseepvqeekeaagsggeglgeaelvaaeekkseeekkkaskkkqkrkk 197
fr+dll+Ger+G++aa+raer rl++ r++ ++ +++d +sqe+ls+e++ a+sgg g+++a ++a+ kk+++ + +++kk++rkk
EMT27094 93 FRWDLLIGERFGLRAALRAERGRLMSPG---CRHH--GYQSGSTIDGASQEVLSNERD-----GAASGGIGEEDAMRMMASGKKQKNGSAGRKAKKARRKK 183
*************************955...5555..5677889***********987.....45566655444444444443333333333344666666 PP
FLO_LFY 198 kkelkse......ededeeeeededeegsgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqkiakerGekcPtkvtnqvfr 287
++l+ + e+ ++e+++++ +g g erqrehPf+vtepgevar+kknGLDYLf+LyeqCr fLlqvq++ak +G+k+Ptkv + r
EMT27094 184 VNDLRLDmqgdehEEGGGGRSESTESSAGGGVGGERQREHPFVVTEPGEVARAKKNGLDYLFHLYEQCRLFLLQVQSMAKLHGQKSPTKVH--IIR 277
6665555333221111112234444455777788*******************************************************94..445 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 305 aa
Download sequence Send
to blast |
MDPNDAFLAA HPFRWDLGPP APAAVPPPPP PPPPPPALPP ANAPRELEDL VVGYGVRAST 60
VARISELGFT ASTLLVMTER ELDDMTAALA GLFRWDLLIG ERFGLRAALR AERGRLMSPG 120
CRHHGYQSGS TIDGASQEVL SNERDGAASG GIGEEDAMRM MASGKKQKNG SAGRKAKKAR 180
RKKVNDLRLD MQGDEHEEGG GGRSESTESS AGGGVGGERQ REHPFVVTEP GEVARAKKNG 240
LDYLFHLYEQ CRLFLLQVQS MAKLHGQKSP TKVHIIRHCY VTLSTYATLA ALSLNTATCQ 300
LLNSP
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor (By similarity). Together with APO1, involved in the temporal regulation of meristem size and identity during both vegetative and reproductive developments through interaction with APO1 (PubMed:21910771). Promotes flowering (PubMed:21910771). {ECO:0000250|UniProtKB:Q00958, ECO:0000269|PubMed:21910771}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AB231888 | 0.0 | AB231888.1 Triticum aestivum WFLa mRNA for FLORICAULA/LEAFY-like protein, complete cds. |
| GenBank | AB231890 | 0.0 | AB231890.1 Triticum aestivum WFLd mRNA for FLORICAULA/LFAFY-like protein, complete cds. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT5G61850.1 | 5e-26 | floral meristem identity control protein LEAFY (LFY) |
