PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT26691
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family M-type_MADS
Protein Properties Length: 367aa    MW: 40001.6 Da    PI: 5.0534
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT26691genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF37.53.1e-121056349
              --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
    SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
              i+++  r vtf kRr g++K    LSv ++a vav++  ++ +++ +
  EMT26691 10 INDDKERDVTFFKRRGGLFKSVADLSVVTGASVAVVLETENERMHSF 56
              8999****************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004321.2E-9159IPR002100Transcription factor, MADS-box
PROSITE profilePS5006616.329160IPR002100Transcription factor, MADS-box
PRINTSPR004043.2E-6222IPR002100Transcription factor, MADS-box
CDDcd002661.80E-14360No hitNo description
SuperFamilySSF554551.83E-14470IPR002100Transcription factor, MADS-box
PfamPF003197.5E-161056IPR002100Transcription factor, MADS-box
PRINTSPR004043.2E-62237IPR002100Transcription factor, MADS-box
PRINTSPR004043.2E-63758IPR002100Transcription factor, MADS-box
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    Send to blast
MDRRSAIAYI NDDKERDVTF FKRRGGLFKS VADLSVVTGA SVAVVLETEN ERMHSFGTPS  60
ADPIVGAFLS GAPLAVPLAD EATTTRVAQL QSEVARLDMN CMKEYKENQL SIKRMKQIQE  120
QCPGMAANLM VSKEEDLSPG ELNNLSNEIS RVHEDIGHRL PQLHHGHKAM TGGASMTQNM  180
LPSSGPPSDR MRTTPSQVHS LWDHHLPQHQ MLSSPLQSPP GHIVAPGFPQ VPPIFHPTPS  240
ALVPQLASQQ ETTPNQAHEL PPTQDISVMD YVSPCNPVNP QQNDANSNST SRYNLGASPL  300
LVYSGGNDFI VNGPFGYESW GYALSDQPFR NEFLETDASL GYNATDVGQS SMGNGEWVDK  360
PQESSSS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020185126.10.0pheromone receptor transcription factor-like
TrEMBLM8CSL10.0M8CSL1_AEGTA; Agamous-like MADS-box protein AGL17
STRINGEMT266910.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP30892276
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22630.11e-12AGAMOUS-like 17