PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT26672
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family bZIP
Protein Properties Length: 334aa    MW: 36715.5 Da    PI: 6.6755
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT26672genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.81.5e-104885539
              CHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHH CS
    bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLee...kvkeLe 39
              k  rr+++NReAArrsR+RKka++++Le    + ++Le
  EMT26672 48 KTLRRLAQNREAARRSRLRKKAYVQHLESsglRLAQLE 85
              6679************************7333444444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.6E-844107IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.764690IPR004827Basic-leucine zipper domain
PfamPF001708.3E-84886IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.93E-74890No hitNo description
Gene3DG3DSA:1.20.5.1703.1E-84892No hitNo description
PROSITE patternPS0003605166IPR004827Basic-leucine zipper domain
PfamPF141443.8E-29130206IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    Send to blast
MDCPSPGGTD TSTDPDLDKN QAFEQGHAAA GLTPPDSSDK SIGELGPKTL RRLAQNREAA  60
RRSRLRKKAY VQHLESSGLR LAQLEQELQR ARQQGFLVST LGDQPDSENG NAASSFYVEY  120
ARWLEEHHKQ VDELRAAVSA HAGDGDLQSI VDTIMARSDE IFRLKGAAAK ADAFRVISGT  180
WMTPVERCFL WLGGFRPSEL LKLLASRLEP LTEKQLDSID VLRRSSLQAE EALCREMEAL  240
RRSVTEAVAA AGSSSLSCSD ADCTGQMAVA VGKLGVMEGL LRQADDLRLR ILEETRRVLT  300
TRQCARAVLV VTDYFSRMRA LSSLWIARPT TGVN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16066RRSRLRK
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3671720.0AK367172.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2052H03.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020175059.10.0transcription factor TGA2.3-like
SwissprotQ415581e-142HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLM8CHF90.0M8CHF9_AEGTA; Putative Transcription factor HBP-1b(C1)
STRINGEMT266720.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2086457
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-114TGACG motif-binding factor 6