PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EMT26666 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family | MYB_related | ||||||||
Protein Properties | Length: 131aa MW: 14046.1 Da PI: 7.443 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 34.8 | 4e-11 | 14 | 52 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg+W+ eEd +l v+ + W++Ia++++ gRt++++k++w EMT26666 14 RGAWSREEDAILTTFVA----R-WSAIAAKLP-GRTDNDVKNHWS 52 89**********99997....6.*********.***********6 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 2.7E-16 | 5 | 58 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 5.46E-13 | 6 | 60 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 17.043 | 9 | 59 | IPR017930 | Myb domain |
SMART | SM00717 | 3.2E-8 | 13 | 57 | IPR001005 | SANT/Myb domain |
Pfam | PF00249 | 4.3E-9 | 14 | 52 | IPR001005 | SANT/Myb domain |
CDD | cd00167 | 6.62E-11 | 16 | 55 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 131 aa Download sequence Send to blast |
MGKSPCCDKA RVKRGAWSRE EDAILTTFVA RWSAIAAKLP GRTDNDVKNH WSTKLKKRHV 60 MLMSTAAAPS TPPTGVAPPA TPPPALVDLE AALATVDDGG ELTCEAEQLY AELMGLIEQQ 120 PTGHGQQRSL L |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | HG670306 | 4e-31 | HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020192021.1 | 4e-62 | transcription factor RAX2-like | ||||
TrEMBL | M8CSI6 | 2e-91 | M8CSI6_AEGTA; Transcription factor RAX1 | ||||
STRING | EMT26666 | 4e-92 | (Aegilops tauschii) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57620.1 | 4e-15 | myb domain protein 36 |