PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT25503
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family CAMTA
Protein Properties Length: 949aa    MW: 107301 Da    PI: 9.183
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT25503genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1133.85.9e-42511783117
      CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpks............gsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahsee 90 
               +e k+rwlk++e+++iL n e + +++ +++rp+s            gs++L+nr++ r+fr+DGy+w+kk++gk+ +E+he LKv++v++l+cyYa++e+
  EMT25503  51 REvKTRWLKPREVLDILRNCELFGIQNRTPQRPPSnktillfsclrgGSWFLFNRRVHRFFRNDGYQWQKKRNGKSGNEAHEYLKVNNVKALNCYYARAEN 151
               56699**********************99999976455555555555899*************************************************** PP

      CG-1  91 nptfqrrcywlLeeelekivlvhylev 117
                ptf rr+yw+Le ++e+ivlvhy++v
  EMT25503 152 SPTFMRRIYWMLEPAYEHIVLVHYRDV 178
               ************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143758.54946184IPR005559CG-1 DNA-binding domain
SMARTSM010765.3E-4849179IPR005559CG-1 DNA-binding domain
PfamPF038597.8E-3753178IPR005559CG-1 DNA-binding domain
CDDcd001020.00233304386No hitNo description
SuperFamilySSF812962.97E-11305384IPR014756Immunoglobulin E-set
PfamPF136377.9E-8508559No hitNo description
SuperFamilySSF484032.33E-14510601IPR020683Ankyrin repeat-containing domain
Gene3DG3DSA:1.25.40.201.6E-14511602IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029715.486511571IPR020683Ankyrin repeat-containing domain
CDDcd002041.70E-12511598No hitNo description
PROSITE profilePS5008811.114539571IPR002110Ankyrin repeat
SMARTSM000150.001696718IPR000048IQ motif, EF-hand binding site
SuperFamilySSF525407.43E-5696746IPR027417P-loop containing nucleoside triphosphate hydrolase
PROSITE profilePS500968.133697726IPR000048IQ motif, EF-hand binding site
PfamPF006120.0077698718IPR000048IQ motif, EF-hand binding site
SMARTSM000150.0079719741IPR000048IQ motif, EF-hand binding site
PfamPF006120.0047721741IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.45721748IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 949 aa     Download sequence    Send to blast
MQQQQGNQGR IPRFPSCNLT PCPVRFLRLI LVTKSQAVRF GCCLDIQNLQ REVKTRWLKP  60
REVLDILRNC ELFGIQNRTP QRPPSNKTIL LFSCLRGGSW FLFNRRVHRF FRNDGYQWQK  120
KRNGKSGNEA HEYLKVNNVK ALNCYYARAE NSPTFMRRIY WMLEPAYEHI VLVHYRDVLE  180
GSISVSALNG SPTSYQNGSA SRADAHSSPG LTSEIIAPRL LSRSPGSAEE VSSQILTINN  240
ESNDTSQFDW RRMLEMQLSL ENKERHDVNT GEVLPNHDPN PMPGIQNEEF DTAPVTVDEN  300
QWFHIHEVSP EWAFCSESAK VVIAGDFPSN ILWVLFGDVK VPAEIVQQGV IRCYTPSYLG  360
AGKVRMCMLD ENGKPCTQDR EFGFVEKPTN TMIIGNGKPY SEAREFEFQQ RPTKSDNELL  420
LLLNYVQMLF DSHGCELFSK FRLPLPNVQS GFPVNPSEII GRTCEQLDHE NAVNCIMEVM  480
LNSKFEDWLS SKFEQNSEGE YLLPKQYHGV IHTIAALGYD WALKPLLNNG VPINYRDANG  540
WTALHWAARF GRQQMVAVLF AAGAAVGALS DPTAEDPAAK TPASIASAYG FIGISAFLSE  600
AELTSTLHSL ESQENGKPVD HNGGVSTSSA VDRVSDKCAH VDGGTDDQLA LRDSLGAIRN  660
AVQAAGCIQA TFRVFSLKKK KQKALQNGDS SASPSMLERA ALSIQKNFRC WKKRKEYQKV  720
RKNVIKIQAR FRAHRERNKY KELLQSVGIL EKIMLRWFRK GVGLRGINSR AMPIDQDEEE  780
DIVKVFRKER LKTAVSEAVS RVSAIVGCPV ARLDYRRMLE WHQQAKACEA EAVAMLRQHF  840
GLPFGPSILQ VVESAGFIDK GTSTAIEKEV IYVNGDRQKP FSSDGDATKA TPPSRICMYI  900
SWEEKRREEK RNPTNSRRDF RRLRTLIGTG TGKKENTPAE RSRKRRLQL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKC6866960.0KC686696.1 Triticum aestivum calmodulin-binding transcription activator 4 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020189403.10.0calmodulin-binding transcription activator 4-like isoform X2
TrEMBLM8BUK50.0M8BUK5_AEGTA; Calmodulin-binding transcription activator 4
STRINGEMT255030.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP94073440
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67310.12e-94Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains