PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT25266
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family MYB
Protein Properties Length: 1625aa    MW: 182669 Da    PI: 7.4712
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT25266genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding61.81.4e-191563148
                     TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd llvd++k++G+g +W+tI+++ g++R++k+c++rw +yl
         EMT25266 15 KGPWTEEEDRLLVDYIKLHGTGgNWRTIPKRAGLNRCGKSCRLRWTNYL 63
                     79*********************************************97 PP
2Myb_DNA-binding42.41.6e-1369113147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg++T eE++  ++++ +lG++ W++Ia +++ gRt++ +k++w++ 
         EMT25266  69 RGPFTDEEEKTTIHLHSMLGNK-WSAIATHLP-GRTGNFIKNYWNTN 113
                      89********************.*********.***********986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129426.3151067IPR017930Myb domain
SuperFamilySSF466895.99E-2912110IPR009057Homeodomain-like
SMARTSM007176.5E-171465IPR001005SANT/Myb domain
PfamPF002491.5E-171563IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.605.8E-231669IPR009057Homeodomain-like
CDDcd001676.09E-121763No hitNo description
SMARTSM007171.0E-1168116IPR001005SANT/Myb domain
PROSITE profilePS5129418.90368118IPR017930Myb domain
PfamPF002491.7E-1269113IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.604.7E-2370118IPR009057Homeodomain-like
CDDcd001672.40E-871114No hitNo description
CDDcd147986.94E-8321439No hitNo description
SuperFamilySSF520581.12E-206651053IPR032675Leucine-rich repeat domain, L domain-like
Gene3DG3DSA:3.80.10.103.9E-10723822IPR032675Leucine-rich repeat domain, L domain-like
Gene3DG3DSA:3.80.10.103.9E-10857899IPR032675Leucine-rich repeat domain, L domain-like
Gene3DG3DSA:3.80.10.103.9E-109361053IPR032675Leucine-rich repeat domain, L domain-like
SuperFamilySSF546951.88E-511631282IPR011333SKP1/BTB/POZ domain
Gene3DG3DSA:3.30.710.109.9E-811681280No hitNo description
PROSITE profilePS5009710.8411701227IPR000210BTB/POZ domain
PfamPF119007.7E-1313211365IPR024228Regulatory protein NPR, central domain
SuperFamilySSF484031.61E-1013631440IPR020683Ankyrin repeat-containing domain
Gene3DG3DSA:1.25.40.201.6E-1013661455IPR020683Ankyrin repeat-containing domain
CDDcd002041.96E-913671439No hitNo description
PROSITE profilePS5029713.65513881455IPR020683Ankyrin repeat-containing domain
PfamPF123131.1E-6414451624IPR021094NPR1/NIM1-like, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0001666Biological Processresponse to hypoxia
GO:0008219Biological Processcell death
GO:0009408Biological Processresponse to heat
GO:0009611Biological Processresponse to wounding
GO:0009625Biological Processresponse to insect
GO:0009682Biological Processinduced systemic resistance
GO:0009862Biological Processsystemic acquired resistance, salicylic acid mediated signaling pathway
GO:0010112Biological Processregulation of systemic acquired resistance
GO:0031348Biological Processnegative regulation of defense response
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:2000022Biological Processregulation of jasmonic acid mediated signaling pathway
GO:2000031Biological Processregulation of salicylic acid mediated signaling pathway
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 1625 aa     Download sequence    Send to blast
MGRSPSCSSE PPLKKGPWTE EEDRLLVDYI KLHGTGGNWR TIPKRAGLNR CGKSCRLRWT  60
NYLHPDIKRG PFTDEEEKTT IHLHSMLGNK WSAIATHLPG RTGNFIKNYW NTNLRKKLLH  120
MGIDPITHNP RTDLSQLTGL PSLPATAAAP SNSLSSVSMP PSTWDMNAAQ AHADVASFAG  180
GGLRIKDEAT SFTGSYSDMK PPMIKDEASS FTGSHSELKP PRIKYEATSF TGSHSDMKPH  240
RIKDEAASFT GRHSDMKPLR IKDEAASFTG SCSDRKPPRI QNEGSYSGAG AGWDMNTLSM  300
RQSNAAKFHL LQGHCWVISA SLGAMRALVG KLDMLLLDDS SSQKFFSKRV MDGMRLLKDD  360
VEEISSYLDE LSEVDDHPPI AMCWMNEVRD LSYDMEDYID SLLSVPPDHF NKNKKKKNKK  420
MMTIKKRLKW YKQITYVMQV SEHGVKTSKR VHVSVVPRLP KKPKIAETIS DFRIYVQEAI  480
ERNLRRRTFL STGHMLPMHY EETNDHVVID GRMNEFIDSL VADQQQLKVP DTIYLICVNS  540
WHAEHVFMMK PLDDDHSRKL FFNRLFGSGS DCPEEFKQVS NEIVDVTIVV KFYFGKNKTK  600
GSIVWKDDLV KQWVAEAFIN TRKGKEKDQN WMEKAAGIYF DELIDRRFIQ PLNINYNNKV  660
LSCTVHEVVR DLLAHKSAEE NFIVVVDYNR KNISLSHKAR RLSLLFATAR YAKTPVNITK  720
PQVRSLNFVG LFECMPCIGE FKVLRVLNLQ LSGHCGDHDP IDLTGISELF QLRYLKITSD  780
VCIKLPNQMR KLQCLETLDI IDAPRVTAIP WDIIYLPHLL HLTLPVDTNL LDWIGSMTDS  840
IISLWSLGNL NYLQDLYLTI SSTHPSGHPE KNMEALGSLL GGHGNLKIIV VSHGPSVKDI  900
VVPGASKVII SWDELEPLPL LQRFECSPHS CVIFSRIPKW VKKLGNLCIL KIAVVELQMS  960
CVDILRGLPA LTALSLYVRC APAQRILFDK MAGFSVLKYF KLRFTSGIPW LKFEADAMPN  1020
LWKLKLGFNA IPRMDQHQLI RIEHMPDLKE ISVKFGGIAA LIEYAVKTVI SNHLRNPRVH  1080
VCLVTSTSYG DESTKEKPPT NSAVESHMAA ATPTETPTSQ VTTAFTHCDS VSTEGAAASG  1140
DADVETLCHL SNNLATAFRP PEDFTFLVDM RAYRSVLSVR SPFLDAVFAR RAAEGEGNPL  1200
DLRELLGEEV EVGYEALQLV LEYLYTGCIR DLPKSACVCA DVDGCAHVGC LPAISFMAQV  1260
IFAASIFQVA VLTNHFQRLL LDVLDDVEVD NLPLILSVAN LCNKSCMHLL ERCLEMVVRS  1320
NLDMITLEKA LPSDIIEQIT DSRLSLGLVS PEDKGFPNKH VRRILRALDS DDVCLVRMLL  1380
KEGRTNLDGA FALHHAVEHC DSKVTMELLD IGLADVNHRN PRGYTVLHVA ARRRDPKILV  1440
SVLTKEEGKP SREDRLCIKI LEQAERRDPQ LGEASVSLAI AGDRQRGKLL YLENRVALMR  1500
IMFPTEARIA MDIAQVDCTL KLTLDSGAKP PPEKELATID LNETPFHMNE EHLARMSTLS  1560
KTVELCKRFF PRCSNVIDKI MDDEPELAPL QRDASTERTQ RFGYLQDAVQ KALSEDKASF  1620
DKSGS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A1e-27111183108B-MYB
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020149274.10.0uncharacterized protein LOC109734478
TrEMBLM8CP040.0M8CP04_AEGTA; Regulatory protein NPR1
STRINGEMT252660.0(Aegilops tauschii)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G05100.11e-63myb domain protein 74