PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EMT25190

Organism

Aegilops tauschii

Taxonomic ID

37682

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops

Family

Nin-like

Protein Properties

Length: 944aa MW: 103467 Da PI: 6.0724

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EMT25190	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	82.3	4.9e-26	583	645	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLg...........vclTvLKriCRqyGIkRWPhRkiksl 52 aek+isle+l++yFs+++k+AAk+Lg +c+T++KriCRq+GI+RWP+Rki+++ EMT25190 583 AEKTISLEVLQQYFSGSLKNAAKSLGglkwqqnvaacMCPTTMKRICRQHGISRWPSRKINKV 645 589**********************************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	14.845	573	665	IPR003035	RWP-RK domain
Pfam	PF02042	2.5E-23	586	645	IPR003035	RWP-RK domain
SuperFamily	SSF54277	5.23E-22	841	934	No hit	No description
PROSITE profile	PS51745	19.189	850	932	IPR000270	PB1 domain
Gene3D	G3DSA:3.10.20.240	1.2E-25	850	931	No hit	No description
SMART	SM00666	2.2E-24	850	932	IPR000270	PB1 domain
Pfam	PF00564	5.9E-15	850	931	IPR000270	PB1 domain
CDD	cd06407	1.03E-33	851	931	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009414	Biological Process	response to water deprivation
GO:0010118	Biological Process	stomatal movement
GO:0010167	Biological Process	response to nitrate
GO:0042128	Biological Process	nitrate assimilation
GO:0005634	Cellular Component	nucleus
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 944 aa Download sequence Send to blast
MDIDPSSVSH ADGGGDLWPF DSLTTSLFFS SVSSSPPLHP LPVASSSWLT PPSPLWLFED 60 RQMMPIEVGP APAATPDNTA AVAEEAQRAR SGNSDTPVKK TERLTNKWQF NLALHDDSTN 120 SSCLFKEKLT HALRYFKEST DQHLLVQVWA PVKSGDRYVL TTSGQPFVLD HQSIGLLQYR 180 AVSMMYMFSV DGDNAGELGL PGRVYKQKVP EWTPNVQYYS STEYPRLNHA ISYNVHGTVA 240 LPVFDPSVQS CIAVVELIMT SKKINYADEV DKVCKALEAV NLKSTEILEH PNVQICNEGR 300 QSALVEILEI LTVVCEEHKL PLAQTWVPCK YRSVLAHGGG VKKSCLSFDG SCMGEVCMST 360 SDVAFHVIDA HMWGFRDACV EHHLQKGQGV SGKAFIYHRP CFSKDISQFC KLEYPLVHYA 420 RMFGLAGCFA ICLQSPYTGD DYYMLEFFLP PSCKEEDDQN ALLESILGLI NQCLRNLKVA 480 GNGESNEASL QLSNVIMIES EDFKTNVHFE NSEGFRESPE GDTHGGAHEF DKANSKVSEG 540 HLLADDNSQN NGVSVSRPNG SAASDSSLLH KNGKPPERRR GKAEKTISLE VLQQYFSGSL 600 KNAAKSLGGL KWQQNVAACM CPTTMKRICR QHGISRWPSR KINKVNRSLS KLKQVIESVQ 660 GSDAAFNLTS ITGPLPTIPV GPSSDSFNKE KASESKAEHS NRAVDGDRDS SLQKSQENGS 720 HFGALMSQQG FADTGNNVQL EADKASLSRS SSGEGSINSR TSEGSCQGSP ANQTFVCQPI 780 ASMFLEPQEP QLNPEGFTKE PFQEPELPLS RMLIEDSGSS KDLKNLFGSA IGQPMLAPPS 840 NFGPMRNSGT VTIKASFKED IVRFRFPCSS SVMALKDEVA KRLRMDAGMF DIKYLDDDHE 900 WVKLACNADL EECIEISRHS GTHVIRLLVS DVAAHIGSSC GSSG

Sequence ? help Back to Top

Protein Sequence Length: 944 aa Download sequence Send to blast

MDIDPSSVSH ADGGGDLWPF DSLTTSLFFS SVSSSPPLHP LPVASSSWLT PPSPLWLFED  60
RQMMPIEVGP APAATPDNTA AVAEEAQRAR SGNSDTPVKK TERLTNKWQF NLALHDDSTN  120
SSCLFKEKLT HALRYFKEST DQHLLVQVWA PVKSGDRYVL TTSGQPFVLD HQSIGLLQYR  180
AVSMMYMFSV DGDNAGELGL PGRVYKQKVP EWTPNVQYYS STEYPRLNHA ISYNVHGTVA  240
LPVFDPSVQS CIAVVELIMT SKKINYADEV DKVCKALEAV NLKSTEILEH PNVQICNEGR  300
QSALVEILEI LTVVCEEHKL PLAQTWVPCK YRSVLAHGGG VKKSCLSFDG SCMGEVCMST  360
SDVAFHVIDA HMWGFRDACV EHHLQKGQGV SGKAFIYHRP CFSKDISQFC KLEYPLVHYA  420
RMFGLAGCFA ICLQSPYTGD DYYMLEFFLP PSCKEEDDQN ALLESILGLI NQCLRNLKVA  480
GNGESNEASL QLSNVIMIES EDFKTNVHFE NSEGFRESPE GDTHGGAHEF DKANSKVSEG  540
HLLADDNSQN NGVSVSRPNG SAASDSSLLH KNGKPPERRR GKAEKTISLE VLQQYFSGSL  600
KNAAKSLGGL KWQQNVAACM CPTTMKRICR QHGISRWPSR KINKVNRSLS KLKQVIESVQ  660
GSDAAFNLTS ITGPLPTIPV GPSSDSFNKE KASESKAEHS NRAVDGDRDS SLQKSQENGS  720
HFGALMSQQG FADTGNNVQL EADKASLSRS SSGEGSINSR TSEGSCQGSP ANQTFVCQPI  780
ASMFLEPQEP QLNPEGFTKE PFQEPELPLS RMLIEDSGSS KDLKNLFGSA IGQPMLAPPS  840
NFGPMRNSGT VTIKASFKED IVRFRFPCSS SVMALKDEVA KRLRMDAGMF DIKYLDDDHE  900
WVKLACNADL EECIEISRHS GTHVIRLLVS DVAAHIGSSC GSSG

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor. {ECO:0000250}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00449	DAP	Transfer from AT4G24020	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HG670306	0.0	HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020163903.1	0.0	protein NLP3-like
Swissprot	Q5NB82	0.0	NLP3_ORYSJ; Protein NLP3
TrEMBL	M8BJK9	0.0	M8BJK9_AEGTA; Uncharacterized protein
STRING	EMT25190	0.0	(Aegilops tauschii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4778	36	60

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	0.0	Nin-like family protein