PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EMT24284 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family | CAMTA | ||||||||
Protein Properties | Length: 1152aa MW: 126876 Da PI: 5.3961 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 172.3 | 7.1e-54 | 142 | 257 | 3 | 117 |
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlL 102 +e k+rwlk++e++ iL n+e+ ++t+e++++p+sg+l+Lynr++ r+frkDGy w++kkdg+tv E+he+LKvg++++l+cyYah+e+np fqrrc+w+L EMT24284 142 REaKSRWLKPSEVYYILLNHEQLQITHEPPNKPPSGALFLYNRRVNRFFRKDGYAWRRKKDGRTVGEAHERLKVGNIDALSCYYAHGEQNPYFQRRCFWML 242 4559************************************************************************************************* PP CG-1 103 eeelekivlvhylev 117 e ++++ivlv+y+ev EMT24284 243 EPAYDHIVLVQYREV 257 *************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51437 | 76.685 | 137 | 263 | IPR005559 | CG-1 DNA-binding domain |
SMART | SM01076 | 1.7E-69 | 140 | 258 | IPR005559 | CG-1 DNA-binding domain |
Pfam | PF03859 | 2.0E-46 | 143 | 256 | IPR005559 | CG-1 DNA-binding domain |
Gene3D | G3DSA:2.60.40.10 | 8.7E-7 | 579 | 670 | IPR013783 | Immunoglobulin-like fold |
SuperFamily | SSF81296 | 9.65E-16 | 579 | 661 | IPR014756 | Immunoglobulin E-set |
Pfam | PF01833 | 2.7E-7 | 579 | 660 | IPR002909 | IPT domain |
Gene3D | G3DSA:1.25.40.20 | 1.6E-14 | 771 | 865 | IPR020683 | Ankyrin repeat-containing domain |
SuperFamily | SSF48403 | 1.71E-14 | 772 | 867 | IPR020683 | Ankyrin repeat-containing domain |
PROSITE profile | PS50297 | 15.247 | 773 | 865 | IPR020683 | Ankyrin repeat-containing domain |
CDD | cd00204 | 1.98E-9 | 778 | 865 | No hit | No description |
SMART | SM00248 | 9.9E-5 | 806 | 835 | IPR002110 | Ankyrin repeat |
PROSITE profile | PS50088 | 11.167 | 806 | 838 | IPR002110 | Ankyrin repeat |
Pfam | PF13637 | 2.8E-5 | 808 | 865 | No hit | No description |
SMART | SM00015 | 33 | 926 | 948 | IPR000048 | IQ motif, EF-hand binding site |
PROSITE profile | PS50096 | 7.218 | 927 | 956 | IPR000048 | IQ motif, EF-hand binding site |
SuperFamily | SSF52540 | 1.38E-6 | 973 | 1032 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
SMART | SM00015 | 6.9 | 986 | 1006 | IPR000048 | IQ motif, EF-hand binding site |
PROSITE profile | PS50096 | 8.462 | 986 | 1014 | IPR000048 | IQ motif, EF-hand binding site |
Pfam | PF00612 | 0.0031 | 987 | 1005 | IPR000048 | IQ motif, EF-hand binding site |
SMART | SM00015 | 3.0E-6 | 1007 | 1029 | IPR000048 | IQ motif, EF-hand binding site |
PROSITE profile | PS50096 | 10.42 | 1008 | 1036 | IPR000048 | IQ motif, EF-hand binding site |
Pfam | PF00612 | 3.7E-5 | 1009 | 1029 | IPR000048 | IQ motif, EF-hand binding site |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005829 | Cellular Component | cytosol | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0005515 | Molecular Function | protein binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 1152 aa Download sequence Send to blast |
MACCFAVSAA WATMNSASMS SMLNPGAGAS SYSGCSSSSS GSATSIRAGC CSSPSSSSAF 60 SSSSSGSSKS RGSPAAMPAA RGVPRPDLLL DLVPALRSCL FGVGASISWS SRPTPSFHES 120 FEAAGSPQVT MSQSFDINVL LREAKSRWLK PSEVYYILLN HEQLQITHEP PNKPPSGALF 180 LYNRRVNRFF RKDGYAWRRK KDGRTVGEAH ERLKVGNIDA LSCYYAHGEQ NPYFQRRCFW 240 MLEPAYDHIV LVQYREVAEG RYYSTLSNGS AGSLSTLSYP NDIHGKHGST SDFSEGNESH 300 QSSVTEVSSY SANKEYNHDS GVLLSIPELQ QSTVMGIPEL DQSSLERSSE FCMVNNNDST 360 NTSGLNQALK SIAEQLSLGD DDYIYINQAR SLDFTTNTEA ADVQGNQTNN SLADDEANQI 420 RPEGAHGVGR GISSSWENVL QSDLGLPASS TYQFGAHYQQ SSEYQPPGGL DSSNLQLQIS 480 AAKRFLLGSE DTIDSPSYNF IPRDEGINGI NTLSAHDSSL ESCLNPDWQR TTPVTLQSSS 540 YQSNSCGYEI SEFFDNGQFE PSSEEDTRLA LKQKQQFSIR EISPEWAFCY EITKVIITGD 600 FLCDPSNICW AVMFGDTEVP VEIVQPGVLR CHTPLHSAGK LTLCITTGNR KVCSEIKDFE 660 FRAKSTASSF TDFAPSSMKS TEELSLIAKF ARILLCDNRS SAASGDDPQP GQSPKLKMNE 720 DNWQRLINEL DVGCENPLSR VDWIMEELLK SKLQQWLSLR LQGDDGTCSL SKNEQGIIHL 780 ISALGYDWAL YSVLGAGVGI NLRDSNGWTA LHWAAYYGRE KMVAALLAAG ASAPAVTDPT 840 AQDPVGKSAA FLASERGHVG LAGYLSEVAL TSYLASLTIE ESGISEGLAA IEAERAVESI 900 SQRSAQLHGG TEDELSLKDS LAAVRNAAQA AARIQNAFRA FSFRRRQHKD ARLKDEYGMT 960 QEDIDELAAA SRLYYQHHVS NGQFCDKAAV SIQKKYRGWK GRKNFLQMRR NVVKIQAHVR 1020 GHQVRKKYKT FVSTVSVLEK VILRWRRKGH GLRGFRAEQS VMIEAEEGEE EDDDEFDDDE 1080 AVKIFRRQKV DESVKESVSR VLSMVDSPEA RMQYRRMLEE FRQATAELGA SDKATSSILD 1140 NDLLVEIDKF TC |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020147564.1 | 0.0 | calmodulin-binding transcription activator 4 isoform X1 | ||||
TrEMBL | M8BQN8 | 0.0 | M8BQN8_AEGTA; Calmodulin-binding transcription activator 4 | ||||
STRING | EMT24284 | 0.0 | (Aegilops tauschii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP6238 | 32 | 41 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67310.1 | 1e-148 | Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains |