PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT22966
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family HB-other
Protein Properties Length: 1822aa    MW: 201370 Da    PI: 5.2458
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT22966genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox33.66.5e-113678345
              --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHH CS
  Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVk 45
              +R   t++qle+Le+ +  ++yp++++r eL++klgLt+rq +
  EMT22966 36 RRVMKTPYQLEVLEQTYTDDPYPNEAKRVELSAKLGLTDRQLQ 78
              69999************************************87 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466894.71E-101478IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.608.2E-111978IPR009057Homeodomain-like
PROSITE profilePS500719.5883179IPR001356Homeobox domain
SMARTSM003892.9E-43393IPR001356Homeobox domain
CDDcd000869.46E-93678No hitNo description
PfamPF000461.7E-83678IPR001356Homeobox domain
PROSITE profilePS5082715.187523582IPR018501DDT domain
SMARTSM005711.7E-14523582IPR018501DDT domain
PfamPF027916.7E-15525579IPR018501DDT domain
PfamPF050664.7E-15746813IPR007759HB1/Asxl, restriction endonuclease HTH domain
PfamPF156123.0E-9957999IPR028942WHIM1 domain
PfamPF156134.0E-1311361207IPR028941WHIM2 domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010228Biological Processvegetative to reproductive phase transition of meristem
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1822 aa     Download sequence    Send to blast
MDSSGDGGDE GAPASSSAPS AGPGGASGSS GKPTARRVMK TPYQLEVLEQ TYTDDPYPNE  60
AKRVELSAKL GLTDRQLQMC SRRGPGRSSA VPRISAPEVD RRYYEAHPVM LPPQAPVQLT  120
RAAHRAIETV QQLIGEPLRE DGPVLGDHFD PLPPGAFGAP MPVVPEQRKQ PYRSHETSVF  180
SAHDPKPMKA SAFLPSIDPS VSSTVTGKRK YMSGNSSHLP SRAVHEYQFL PEHTSDIYER  240
TSQSCFYDAS AEASNSRISS LSTGSRLVHG AEKASSYAFD GQVSGSSHLN QHGKPLISLS  300
GSTDYEMASN IDVSPAPIEG QFGIPQVAGL QNPLASAEGV DYHDDAYRLD RKRKHNEESK  360
IAKEVDAEEK RIRKELEKQD VLKKKREEQM RKEVERYDRE RKKEEERFMR EKQREEERLQ  420
KEQWREQKRM EKFLVKQSLR AEKLKQKEEL RKEKEAARQK AANERATARR IAREYMELME  480
DERMLTQFPT EAFYPCAGML TQFPTEAVRL KVPFSIKPWT SSESNIGNLL MVWKFFFTFA  540
DVLELPSFTL DEFVQSLHDY DSRLLGELHV AVLKSIIKDI EDVARTSSVV SGVNQSSSAN  600
PGGGHPQIVE GAYAWGFNIL TWQRHLTYLT WPEILRQFGL SAGFGPQLKK RTEDVYHDDN  660
EVLTFESFQY TYDISLTATP SVPQYMGRRE YIVGQSIYGP SYKKGRNSAD VISTLRNGSA  720
AVKSAALMKE RGYTNRRRSR HRLTPGTVKF AAFHVLSLEG DEGLSILEVA EKIQRSGLRD  780
LTTSKTPEAS ISAALSRDTK LFERTAPSTY CVKTPYRKDP ADSEAVFSEA REKIRVFQNA  840
LSGCEEVEKD VEDAERGDDD SECDEADDDP DGDEVNIEEK DVNASVARAK DAGLPIAAGD  900
INDEVKGVIN PSMPSSPHSK SPSGLQRMVD KSTAVSTSSD PPIGASQDAE IDESNQGESW  960
VQGLAEGDYC DLSVEERLNA LVALIGVATE GNSMRAILEE RLEAANALKK QMWAESQLDR  1020
RRSREEFAGR MQHDPCTDLK ADVDQGNNVG ECTLTPVHNL IKENGGKASS VNNDLLVDQQ  1080
CQLNAGNMVH EGNGVSRISN ANPESLSAQQ YASSEKTRSQ LKSFIGHKAE QLYVYRSLPL  1140
GQDRRRNRYW QFSTSVSSND PGSGRIFFES RDGYWRLIDS AEAFDALVAS LDTRGIRESH  1200
LHSMLQSIES TFKDAIGWIK CATIEHSAGR NLRNGSSEII SPNHSNEFGS PCSTLSGVVS  1260
DTGVAYSDSF KIELGRNDLE KVAISKRACM FLKWMWEGNN HQSTCAMKYG KKRCSDLIHG  1320
CDYCYQIYLA EETHCSSCHK TFKSIHSLSE HTSQCEEKRR TDPNWKIQIS DDSVPIRPRL  1380
LKLLLATVEA SVPAEALQPF WTDGYRKSWG VKLFSTSSNE EIFQLLTVLE GALKRDYLSS  1440
NFETTAELLN SNTLDFAGRN SIACSGSAAV LPWVPSTAAA VTLRLLDLDS SLSYTLDQKA  1500
GLNKEREAGD FIKGPSRYTA VKNKQEMGLV GAPGFDHHVG AQLTPSNGLR GRGRGGRGRG  1560
RGGRSLSRGG RVPRGVGSSP RIEFRDDNNV SYKETTDKQA GRGRGRGRGR GRGRGRGRGR  1620
GSITVSGSGS GSVRGRGRGR GRGLRTVRPR QPVELGARSI PKANLLGTFG MLSNAKPMTL  1680
HSPQSSGAEE WGLDRRAYAE DDEDNSVSQS DESEGDEENG EPMNEDYDEQ LPDYSRDNSG  1740
SSPRQMMDSE SEDNDEYDEE GEEDGADYDA EQPMDEDNDD AEMSGDDELG DDGDDDDGGG  1800
SQVGAGNADD DDATSYSSEY SE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
116091619RGRGRGRGRGR
216331642RGRGRGRGRG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020162194.10.0homeobox-DDT domain protein RLT2-like
TrEMBLM8CI710.0M8CI71_AEGTA; Uncharacterized protein
STRINGEMT229660.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP22833352
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44180.10.0Homeodomain-like transcriptional regulator