PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT22774
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family TALE
Protein Properties Length: 350aa    MW: 38593.6 Da    PI: 10.6026
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT22774genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox22.61.8e-071942272154
               HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
  Homeobox  21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 
               k +yp++e++++L +++gL+ +q+ +WF N+R +
  EMT22774 194 KWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 227
               569*****************************87 PP
2ELK29.22.1e-10148169122
       ELK   1 ELKhqLlrKYsgyLgsLkqEFs 22 
               ELKh+L+++Y+++L+++++E++
  EMT22774 148 ELKHELKQGYREKLVDIREEIL 169
               9*******************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM011880.0014148169IPR005539ELK domain
PROSITE profilePS5121310.196148168IPR005539ELK domain
PfamPF037893.3E-6148169IPR005539ELK domain
PROSITE profilePS5007111.596168231IPR001356Homeobox domain
SMARTSM003894.9E-10170235IPR001356Homeobox domain
SuperFamilySSF466891.2E-15170235IPR009057Homeodomain-like
CDDcd000865.07E-11171232No hitNo description
Gene3DG3DSA:1.10.10.603.9E-24175232IPR009057Homeodomain-like
PfamPF059204.2E-18188227IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009416Biological Processresponse to light stimulus
GO:0009722Biological Processdetection of cytokinin stimulus
GO:0071345Biological Processcellular response to cytokine stimulus
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    Send to blast
MAYQYHHQDH ALGMDAAAAA AGNPGGGFAP DTLCAAALFL QGTAPAACAR PRHGSGDGLL  60
GARADFAESY SYKNRRLKLL NLALKLYLLR FQFGASPGEG TGATMSDDED NPVDSESNMF  120
DGNDVSDGMG FGMLTEGERS LVERVRQELK HELKQGYREK LVDIREEILR KRRAGKLPGD  180
TASTLKAWWQ AHAKWPYPTE EDKARLVQET GLQLKQINNW FINQRKRNWH SNPTSSSSDK  240
SKRKSCFVAR RRARRRGVAV AVFRQKKNHE GPERVKLIIT PGSRARGAWT LGVAAAHVPR  300
AWAPLLPRTS LGRAKSAASK MASAWVSHGP QNLHKTKDDG HTSNKGLFDS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17278KNRRLKL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3539450.0AK353945.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv1003P14.
GenBankAK3582110.0AK358211.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1071D15.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020196996.11e-115homeobox protein knotted-1-like 11 isoform X1
RefseqXP_020196997.11e-116homeobox protein knotted-1-like 11 isoform X2
TrEMBLM8BLF90.0M8BLF9_AEGTA; Homeobox protein knotted-1-like 11
STRINGEMT227740.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP56438169
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11060.14e-79KNOTTED1-like homeobox gene 4