PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EMT22665 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family | AP2 | ||||||||
Protein Properties | Length: 411aa MW: 44538.1 Da PI: 9.3681 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50 | 7.2e-16 | 60 | 119 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+++GV++++++gr++A+++d s+n k+ k+++lg ++ +e Aa+a++ a++k++g EMT22665 60 SRFRGVSRHRWTGRYEAHLWDkNSWNPtqrKKgKQVYLGAYDEEEAAARAYDLAALKYWG 119 789******************888855666447*************************98 PP | |||||||
2 | AP2 | 55.3 | 1.6e-17 | 162 | 213 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++++grW+A+I + g +k+ +lg++gt eeAa+a++ a+ +++g EMT22665 162 SKYRGVARHHQNGRWEARIGRvF---G-NKYLYLGTYGTQEEAARAYDIAAIEYKG 213 89****************99966...3.6***********************9986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF54171 | 1.7E-16 | 60 | 128 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 5.1E-12 | 60 | 119 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.7E-15 | 61 | 128 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 9.1E-24 | 61 | 133 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 19.664 | 61 | 127 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 3.53E-17 | 162 | 222 | IPR016177 | DNA-binding domain |
CDD | cd00018 | 2.89E-23 | 162 | 221 | No hit | No description |
Pfam | PF00847 | 2.1E-12 | 162 | 213 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 4.6E-17 | 163 | 221 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 9.6E-26 | 163 | 227 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 18.769 | 163 | 221 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006110 | Biological Process | regulation of glycolytic process | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009744 | Biological Process | response to sucrose | ||||
GO:0019432 | Biological Process | triglyceride biosynthetic process | ||||
GO:1901959 | Biological Process | positive regulation of cutin biosynthetic process | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 411 aa Download sequence Send to blast |
MDSILMVKSE IESYAGQPAV VGGGGGEVVV RRRRREPTLG PVGGGIGKAS LPGVAVKRSS 60 RFRGVSRHRW TGRYEAHLWD KNSWNPTQRK KGKQVYLGAY DEEEAAARAY DLAALKYWGA 120 TTYTNFPVMD YDKELKIMET LTKEEYLASL RRKSSGFSRG VSKYRGVARH HQNGRWEARI 180 GRVFGNKYLY LGTYGTQEEA ARAYDIAAIE YKGVNAVTNF DLRSYITWLK PPVAGPAVLA 240 DHLLAGMHTQ LPPSPVEHER FLPAEAHLML PPTTAAAPGS PFILDHSAAA LGGGLRRRSS 300 SSSSSTALSL LLKSTMFKQL VERNDPDSPQ GTGGCADRVG ELPAGEGSYE YRDFFHGVSS 360 DVCGLFSSPS NACGNNAGFQ GAAVASCYGS GERMAPTTTP WDGFGDIAAL Q |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 85 | 93 | PTQRKKGKQ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010231106.1 | 1e-161 | ethylene-responsive transcription factor WRI1 | ||||
TrEMBL | M8BCP9 | 0.0 | M8BCP9_AEGTA; Ethylene-responsive transcription factor WRI1 | ||||
STRING | EMT22665 | 0.0 | (Aegilops tauschii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4162 | 34 | 73 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G16060.1 | 7e-79 | ARIA-interacting double AP2 domain protein |