PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EMT22348 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family | ERF | ||||||||
Protein Properties | Length: 217aa MW: 22592.8 Da PI: 6.7831 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 26.9 | 1.2e-08 | 95 | 122 | 28 | 55 |
AP2 28 rkrfslgkfgtaeeAakaaiaarkkleg 55 ++r+++g+f+ta eAa a++a +++++g EMT22348 95 KARVWIGTFDTAAEAAHAYDAEARRIHG 122 49************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 13.656 | 26 | 130 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 8.3E-5 | 85 | 122 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 9.5E-8 | 85 | 136 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 4.77E-11 | 93 | 131 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 1.4E-16 | 94 | 131 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence Send to blast |
MCGGKFATND RGKGRPGQSP SAGKAKMRGG WPTDEDSDDW EAAFREFVAA DDGDVLNEPL 60 PTGRSGAGPA LATRTAASGS GRGGGGRRKS ATPSKARVWI GTFDTAAEAA HAYDAEARRI 120 HGRKARTNFP AAPAAPYSDR PGPSSRSSVT DGGADNVARA TESASSSFKE LFKDVHGTAP 180 YDARILLECC SDDVMESLLA GSDMAGNMDL SSFRFPS |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015610635.1 | 6e-21 | ethylene-responsive transcription factor 1-like | ||||
TrEMBL | M8BKN2 | 1e-153 | M8BKN2_AEGTA; Ethylene-responsive transcription factor 1 | ||||
STRING | EMT22348 | 1e-154 | (Aegilops tauschii) |