PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EMT22201 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family | NAC | ||||||||
Protein Properties | Length: 429aa MW: 47360.8 Da PI: 4.1104 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 159.5 | 1.4e-49 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhPtd elv++yLk+k+ gkkl + e+i+ev++yk+ PwdLp k ++++++ ew+fF++rdkky++g+r+nrat +gyWk++gkd+++ +++ EMT22201 6 LPPGFRFHPTDVELVSYYLKRKIMGKKLFV-EAISEVELYKFAPWDLPdKsCLQSKDLEWFFFCPRDKKYPKGSRTNRATPNGYWKTSGKDRTIEL-NSRI 104 79*************************999.89**************96347777888**************************************.999* PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 vglkktL+f++g+apkg++tdWvm ey++ EMT22201 105 VGLKKTLIFHEGKAPKGNRTDWVMYEYKM 133 ***************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 6.02E-59 | 3 | 156 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 56.398 | 6 | 156 | IPR003441 | NAC domain |
Pfam | PF02365 | 8.5E-26 | 7 | 132 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 429 aa Download sequence Send to blast |
MAQACLPPGF RFHPTDVELV SYYLKRKIMG KKLFVEAISE VELYKFAPWD LPDKSCLQSK 60 DLEWFFFCPR DKKYPKGSRT NRATPNGYWK TSGKDRTIEL NSRIVGLKKT LIFHEGKAPK 120 GNRTDWVMYE YKMEDETLVS AGFSKDAYVL CKIFKKSGLG PRIGEQYGAP FDENEWENLD 180 VGSSIFSFAP SSGVEDPQVE SSALATAIVM QEPSAPQQSV QFSEHVNICS DEVNDAPPEI 240 DGILLDELAK FLDDSPNDDV VLPENSGLPP MSELEAQAFE INTAELYDQL AGLSQSGDMS 300 TVNFPASNGD VIENNLQQAN SGLAMDDDYI GLDDLLAPGE TFSYDFSGET FSYDLPGGSF 360 SYDLSVPNNQ FLLYPLDQST SGSHYGVGAT QSTFEASGTL PPMQPMPSTF NDMPSVSNCL 420 NPAMKDPFS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 5e-51 | 2 | 157 | 11 | 169 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00583 | DAP | Transfer from AT5G64060 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AB362161 | 0.0 | AB362161.1 Hordeum vulgare subsp. vulgare mRNA for transcription factor, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020200154.1 | 0.0 | NAC domain-containing protein 13-like | ||||
TrEMBL | A0A452Z640 | 0.0 | A0A452Z640_AEGTS; Uncharacterized protein | ||||
TrEMBL | M8CG86 | 0.0 | M8CG86_AEGTA; NAC domain-containing protein 78 | ||||
STRING | EMT22201 | 0.0 | (Aegilops tauschii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4731 | 36 | 64 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64060.1 | 2e-83 | NAC domain containing protein 103 |