PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EMT21326

Organism

Aegilops tauschii

Taxonomic ID

37682

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops

Family

bZIP

Protein Properties

Length: 297aa MW: 32687.8 Da PI: 8.0919

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EMT21326	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	21.5	4.9e-07	46	66	5	25
CHHHCHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKk 25 k rr+++NReAAr+sR+RKk EMT21326 46 KTMRRLAQNREAARKSRLRKK 66 7789****************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	5.4E-4	38	68	No hit	No description
Pfam	PF07716	1.1E-4	44	71	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	49	64	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	4.3E-34	132	207	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence Send to blast
MAEASPRTET STDDTDENLM LEPGNAALAV VSDSSDRSRD KNGDQKTMRR LAQNREAARK 60 SRLRKKIKHR SRSSGFACKP LKEFKVSTGW LLKELSGIFI SSSADQSHSM SGNGALAFDT 120 EYARWLEEHN RQVNELRAAV NAHAGDTELR SVVEKIMSHY DDIFKQKGNA AKADVFHVLS 180 GMWKTPAERC FLWLGGFRPS ELLKLLSTQL EPLTEQQLSG ICNLQQSSQQ AEDALSQGME 240 ALQQSLAETL AGSIGSSGSG STGNVANYMG QMAMAMGKLG TLENFLRQVF TLLRMYG

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	X56782	0.0	X56782.1 T.aestivum 1b-c38 gene for HBP-1b (leucine zipper type transcription factor).

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020164500.1	1e-177	transcription factor HBP-1b(c38) isoform X1
Refseq	XP_020164501.1	1e-177	transcription factor HBP-1b(c38) isoform X1
Swissprot	P23923	1e-176	HBP1B_WHEAT; Transcription factor HBP-1b(c38)
TrEMBL	M8CDU7	0.0	M8CDU7_AEGTA; Transcription factor HBP-1b(C38)
STRING	EMT21326	0.0	(Aegilops tauschii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP486	38	185

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12250.2	1e-114	TGACG motif-binding factor 6

Publications ? help Back to Top
Tabata T,Nakayama T,Mikami K,Iwabuchi M HBP-1a and HBP-1b: leucine zipper-type transcription factors of wheat. EMBO J., 1991. 10(6): p. 1459-67 [PMID:2026143]