PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT21296
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family STAT
Protein Properties Length: 690aa    MW: 75624.6 Da    PI: 5.948
Description STAT family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT21296genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1STAT185.56.7e-582353561121
      STAT   1 ldvvllnalgqpvekdvevvasLlyadsglvveks.ddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfeipklkkypflea 100
               l+vvl+na+g+ ++kd+++vasL+yad+g++veks ddae+pLLi+++G+e+++e+rpl++lrGra+fklkisqLsskcdn+Lfri+f++++ +kypflea
  EMT21296 235 LEVVLTNAFGEHMNKDTQIVASLVYADNGALVEKSrDDAEPPLLIACEGLEYPAESRPLPILRGRALFKLKISQLSSKCDNKLFRIYFSTLHTRKYPFLEA 335
               79*********************************9***************************************************************** PP

      STAT 101 vskpirCisrsrntrsssltk 121
                skpirCisr r +r+++++k
  EMT21296 336 SSKPIRCISRGRPSRPLGAAK 356
               ***************988765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF498994.75E-741199IPR013320Concanavalin A-like lectin/glucanase domain
SuperFamilySSF555505.45E-8595677IPR000980SH2 domain
Gene3DG3DSA:3.30.505.106.6E-4595663IPR000980SH2 domain
PROSITE profilePS500019.618599690IPR000980SH2 domain
Sequence ? help Back to Top
Protein Sequence    Length: 690 aa     Download sequence    Send to blast
MAAPAEPGEI EGYLGLRDVR VKLDLGKARG RGEEGAGAGA GGGFAVCFWL YLSGSARPSP  60
VILHQITAGD GNKLPFLALS EGNKLLLFPL LRLHKQAPSS SNSSPWTDTT YISAVNECPL  120
EHWIHIGCEV TENVMRLHID GDLVAEAHLC SLSSQPDNQD DAYQVCLLGN NSKVDGYVYN  180
VQVLSMLGTI QEQYAENPPS KLSIDYSCCD GIEEGDDGIW CIVGGKASCR RNFMLEVVLT  240
NAFGEHMNKD TQIVASLVYA DNGALVEKSR DDAEPPLLIA CEGLEYPAES RPLPILRGRA  300
LFKLKISQLS SKCDNKLFRI YFSTLHTRKY PFLEASSKPI RCISRGRPSR PLGAAKRSSS  360
ATVDEIHLLN NGQGLDRDGK ANACSLSHDQ SSVACLHPSK FLKSKQTRKM VVEAQSARTE  420
STMSDSDSID ARSSWSGSDK DEAETLSDAM IFRYCLEGTY ERSTFLKGAA SSINVDDLIT  480
LANEVSLYSG CSHHRNQILI SKQLLEEGAV TWSIISKNKE RALWSSAVPE IMSKFMDIAH  540
STNRGLSEQD LEVLKGIAGC GADLGRNEFD RLWYWLYPVA VSLSKDKINS LWGCTAPAWI  600
EGLITTEEAE NALRSSRELL KKPGTFVLRF PTTRSWPHPD AGSLVVTYVG SDNSIHHRLL  660
SLDVSDARAG SLQDLLLQEP ELLQLGRQAH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020194163.10.0uncharacterized protein LOC109779975 isoform X2
TrEMBLM8CDS30.0M8CDS3_AEGTA; Uncharacterized protein
STRINGEMT212960.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP75473135
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78540.11e-150SH2 domain protein B