PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT21260
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family GRAS
Protein Properties Length: 1316aa    MW: 147288 Da    PI: 6.048
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT21260genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS246.41.1e-7579710411247
      GRAS    1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99  
                l++++++c +a + +   +++ l+++l++l+s +gdpmqRl a+++e+L ar ++s+s+lyk+l+++e +   s e +++++l+++++P++kf+++ aN
  EMT21260  797 LKQVIIACGKAAAGNGIYETEVLISELRQLVSISGDPMQRLGACMLEGLVARFSSSGSKLYKSLNCKEPT---SPELMSYMHLLYDMCPLYKFGYMSAN 892 
                57899****************************************************************9...99************************ PP

      GRAS  100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196 
                 aI eav+ge+ vHiiDf+i qG QW++++qaLa+Rp+gpp lRiTg+++++s   +   l  +g rL+++ +++g+pfefn+ v+ + +++ +++L++
  EMT21260  893 GAIAEAVKGENFVHIIDFQIAQGSQWITIIQALAARPAGPPCLRITGIDDSNSAyaRGGGLDMVGTRLHSISASCGLPFEFNA-VHAASHEVYIQHLDT 990 
                **************************************************988899999************************.688999999****** PP

      GRAS  197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqead 247 
                +pgEa++Vn+++qlh+++desvs+e++rd++++++ksl P+vv++ve e++
  EMT21260  991 RPGEAIVVNFAYQLHHTPDESVSVENHRDRIIRMIKSLAPRVVTLVEPETN 1041
                ***********************************************9987 PP
2GRAS326.45.8e-1001040131698374
      GRAS   98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeL 194 
                +N aI eav+ge+ vHiiDf+i qG QW++++qaLa+Rp+gpp lRiTg+++++s   +   l  +g rL+++ +++g+pfefn+ v+ + +++ +++L
  EMT21260 1040 TNAAIAEAVKGENFVHIIDFQIAQGSQWITIIQALAARPAGPPCLRITGIDDSNSAyaRGGGLDMVGTRLHSISASCGLPFEFNA-VHAASHEVYIQHL 1137
                7***************************************************988899999************************.688999999**** PP

      GRAS  195 rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgre 293 
                +++pgEa++Vn+++qlh+++desvs+e++rd++++++ksl P+vv++veqe+++n+++F++r le+l+yy+a+f+s+++ lpr++++ri+ E+++l+r+
  EMT21260 1138 DTRPGEAIVVNFAYQLHHTPDESVSVENHRDRIIRMIKSLAPRVVTLVEQESNTNTTPFFQRYLETLDYYTAVFESIDVALPRDDKTRISTEQHCLARD 1236
                *************************************************************************************************** PP

      GRAS  294 ivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 
                i +++acegaer+erhe ++kW++r+ +aGF+p+pl + +++++k+ll  ++ + yr+ee++g l+lgWk+r Lv+ SaWr
  EMT21260 1237 IISLIACEGAERVERHEVFGKWKARFAMAGFRPYPLCSLVNNTIKTLLDDYH-RCYRLEERDGVLYLGWKSRMLVVSSAWR 1316
                ****************************************************.77*************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF561121.91E-6310246IPR011009Protein kinase-like domain
Gene3DG3DSA:3.30.200.202.3E-221396No hitNo description
SMARTSM002202.8E-2723334IPR000719Protein kinase domain
PROSITE profilePS5001134.83123293IPR000719Protein kinase domain
PfamPF000692.7E-4723251IPR000719Protein kinase domain
PROSITE patternPS0010702952IPR017441Protein kinase, ATP binding site
Gene3DG3DSA:1.10.510.107.5E-40117265No hitNo description
PROSITE patternPS001080158170IPR008271Serine/threonine-protein kinase, active site
PfamPF078873.2E-89358638IPR012416CALMODULIN-BINDING PROTEIN60
PROSITE profilePS5098561.0527711297IPR005202Transcription factor GRAS
PfamPF035142.0E-9710401316IPR005202Transcription factor GRAS
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006468Biological Processprotein phosphorylation
GO:0006950Biological Processresponse to stress
GO:0004672Molecular Functionprotein kinase activity
GO:0005516Molecular Functioncalmodulin binding
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 1316 aa     Download sequence    Send to blast
MDDAGSESTA VPLDLLLQIT DGFSEERKLG SGSFGEVYLG VHPDGQKIAV KKIYDMPGVD  60
EEQFQNEFKN LARLQHRNIV RLVGYCHHIQ EVPAMYEGKL VLAEKIHRAL CLEYMSNGSL  120
EKYISDECDK YDWHTGYGII KGICQGLKYL HTKLKPPIYH LDLKPANILL DENMVPRIAD  180
FGISRLFGDE RTRATKSTLG TQGYLPPEYI RNYLISSKFD IFSLGVVIIK IMAGRAGYYR  240
SAEMSSHEFT NFVQENWTNR LHETSSLMKA YSKQENSGGL TPDYFMNNGR PVSEVPLNND  300
ASPSKQARTA WQYPTDMTAQ QAIAELGERQ AASLPDGIYE PPRQISEGFP ESGGTTRVKL  360
RFVDVEGPKD PLYTGCPVQW LNGENAKVVI FENDKQITQG NLSKLKIEIL AVHADFFTER  420
GQADFTKEEF NKQIHMYNEN ESVLTTVNLK NGEACIGSFF FTESYRKKLR LTARVERQDL  480
AVRVQEAITD PFVIKDHRSA LNGKRYPPSK EEAVHHLENI SLKGKRCNDL ADKNITTVKR  540
LMRHYHRDKS GLQKLTGMKD EDWSTMVTHA TTCDPGVEIY SYGVAEENCE LLFNDFYDLV  600
GVLTNGDYVP VSHLDQFQQL KMKSWKMSAF KKLEEREKSG VLIPDYLMMN GCPVRTVPLN  660
NDAGPSVQAK RTSQYPNDIA AQHEFGDSEF GDRHSLIGFS LAEVLSNNDA GDSKQEQTVH  720
QGHGQPDASI TQANILNDQG SLSAQPTPLH NFLPVPADEM ITRASLTDEQ TEYFSTTDEQ  780
TEYFSTTDSL GINTGDLKQV IIACGKAAAG NGIYETEVLI SELRQLVSIS GDPMQRLGAC  840
MLEGLVARFS SSGSKLYKSL NCKEPTSPEL MSYMHLLYDM CPLYKFGYMS ANGAIAEAVK  900
GENFVHIIDF QIAQGSQWIT IIQALAARPA GPPCLRITGI DDSNSAYARG GGLDMVGTRL  960
HSISASCGLP FEFNAVHAAS HEVYIQHLDT RPGEAIVVNF AYQLHHTPDE SVSVENHRDR  1020
IIRMIKSLAP RVVTLVEPET NAAIAEAVKG ENFVHIIDFQ IAQGSQWITI IQALAARPAG  1080
PPCLRITGID DSNSAYARGG GLDMVGTRLH SISASCGLPF EFNAVHAASH EVYIQHLDTR  1140
PGEAIVVNFA YQLHHTPDES VSVENHRDRI IRMIKSLAPR VVTLVEQESN TNTTPFFQRY  1200
LETLDYYTAV FESIDVALPR DDKTRISTEQ HCLARDIISL IACEGAERVE RHEVFGKWKA  1260
RFAMAGFRPY PLCSLVNNTI KTLLDDYHRC YRLEERDGVL YLGWKSRMLV VSSAWR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5hyz_A5e-4479413161375GRAS family transcription factor containing protein, expressed
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2525670.0AK252567.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf156f06, mRNA sequence.
GenBankAK3609130.0AK360913.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1128D13.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020164220.10.0serine/threonine-protein kinase PBL27-like
TrEMBLM8B9030.0M8B903_AEGTA; Uncharacterized protein
STRINGEMT212600.0(Aegilops tauschii)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.21e-128GRAS family protein