PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT21256
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family TALE
Protein Properties Length: 457aa    MW: 50742.6 Da    PI: 7.1783
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT21256genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox23.97.1e-082743111954
               HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
  Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
               Fe   ++yp+  ++  LA++ gL+ +qV++WF N R +
  EMT21256 274 FEHflHPYPNDVDKHILARQSGLSRSQVSNWFINARVR 311
               5544589*****************************88 PP
2BELL92.83.2e-30129198372
      BELL   3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
               ++l+++ka+Lls++eeVd+ Y++y+e++++   sFeavag g+a++Yt+lA++a+SrhFrcL+da+++qi
  EMT21256 129 MALERRKARLLSMIEEVDRCYRRYREKMRATELSFEAVAGTGAAQVYTKLAMRAMSRHFRCLRDALVGQI 198
               6899****************************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005743.5E-4462196IPR006563POX domain
PfamPF075261.0E-3768194IPR006563POX domain
PROSITE profilePS5007111.272252315IPR001356Homeobox domain
CDDcd000864.51E-11255316No hitNo description
SMARTSM003891.0E-7255319IPR001356Homeobox domain
SuperFamilySSF466891.58E-16256322IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.7E-26258321IPR009057Homeodomain-like
PfamPF059202.3E-16272311IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0048481Biological Processplant ovule development
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0009506Cellular Componentplasmodesma
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 457 aa     Download sequence    Send to blast
MAMAFDHHGL FAPLHGDMPP RSGGADDRPW LPQVSTLSLY DMASQHELQP FTVAPPSMMS  60
MQQQPFRLNS SRYLGPAREL LGEFCSLEGD AMNGGAMMRA PKRDGEVEAS SPACGPWGAN  120
PSLSSMNYMA LERRKARLLS MIEEVDRCYR RYREKMRATE LSFEAVAGTG AAQVYTKLAM  180
RAMSRHFRCL RDALVGQIRT LKKSMGESRD AEGMLVAPGA SKGDTPRLRV VDQCLRRQRA  240
FQQYGGAAAI ESCPWRPQRG LPERAVAVLR SWLFEHFLHP YPNDVDKHIL ARQSGLSRSQ  300
VSNWFINARV RLWKPMIEEM YAEETIQHDD GGTSGGKGEL APTDHHNNNL AAWTTVTTTG  360
DQSCHRLSGR NNPGDCFIPS SLVADGSQFL HDYPSLCSDS GSGMVSLTLG LQQQRAFTSP  420
AMIMQQQSPL MIGAEEEDMV LPYRNLMGSE LLHDFVG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrm_A6e-15261319563Homeobox protein Meis2
4xrm_B6e-15261319563Homeobox protein Meis2
5bng_A5e-15261319159Homeobox protein Meis2
5bng_B5e-15261319159Homeobox protein Meis2
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020149277.10.0homeobox protein BEL1 homolog
RefseqXP_020166134.10.0homeobox protein BEL1 homolog
TrEMBLM8CDP40.0M8CDP4_AEGTA; Homeobox BEL1-like protein
STRINGEMT212560.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63983547
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41410.14e-96TALE family protein