PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EMT21245 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family | BES1 | ||||||||
Protein Properties | Length: 335aa MW: 35209.1 Da PI: 8.4037 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 214.1 | 3.3e-66 | 21 | 168 | 1 | 149 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqsslkss 101 g++gr+ptw+ErEnnkrRERrRRaiaakiy+GLRa+Gny+lpk++DnneVlkALc+eAGwvve+DGttyrkg++p e+++ +g+s s sp+ss+q EMT21245 21 GAGGRMPTWRERENNKRRERRRRAIAAKIYTGLRAYGNYNLPKHCDNNEVLKALCNEAGWVVEPDGTTYRKGCRPAERMDGIGCSVSPSPCSSYQ------ 115 689********************************************************************************************...... PP DUF822 102 alaspvesysaspksssfpspssldsislasa.......asllpvlsvlslvsss 149 +sp++sy+asp+sssfps +s+ +++++++ + +lp+l++ s++++s EMT21245 116 --PSPRASYNASPTSSSFPSGASSPFLPHSNNmvngvdaTPILPWLQTFSNSTAS 168 ..99999999999999999999999999988889998889999999999887766 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 7.3E-66 | 23 | 162 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
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Protein Sequence Length: 335 aa Download sequence Send to blast |
MATGGGGGGG GGGADFGAAG GAGGRMPTWR ERENNKRRER RRRAIAAKIY TGLRAYGNYN 60 LPKHCDNNEV LKALCNEAGW VVEPDGTTYR KGCRPAERMD GIGCSVSPSP CSSYQPSPRA 120 SYNASPTSSS FPSGASSPFL PHSNNMVNGV DATPILPWLQ TFSNSTASNK RPHLPPLLIH 180 GGSISAPVTP PLSSPTARTP RMKTDWDESV IQPPWHGSNS PCVISSTSPS SPTFSLMSSN 240 PFSVFKEAIP GGGSSRMCTP GQSGTCSPVI PGMARHPDVH MMDVVSDEFA FGSSTNGGAQ 300 QATAGLVRAW EGERIHEDSG SDELELTLGS SRTRS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5zd4_A | 8e-26 | 25 | 95 | 372 | 442 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 8e-26 | 25 | 95 | 372 | 442 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 8e-26 | 25 | 95 | 372 | 442 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 8e-26 | 25 | 95 | 372 | 442 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | May function in brassinosteroid signaling. {ECO:0000250}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK252468 | 0.0 | AK252468.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf161n20, mRNA sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020188462.1 | 1e-180 | protein BZR1 homolog 2 | ||||
Swissprot | Q0JPT4 | 1e-149 | BZR2_ORYSJ; Protein BZR1 homolog 2 | ||||
TrEMBL | M8B8X5 | 0.0 | M8B8X5_AEGTA; Uncharacterized protein | ||||
STRING | EMT21245 | 0.0 | (Aegilops tauschii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1366 | 38 | 112 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G78700.1 | 2e-67 | BES1/BZR1 homolog 4 |
Publications ? help Back to Top | |||
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