PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT20919
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family C2H2
Protein Properties Length: 305aa    MW: 33410.3 Da    PI: 4.9324
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT20919genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.23e-05273295123
               EEETTTTEEESSHHHHHHHHHHT CS
   zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
               y+C++Cg+ F ++  +  H+++H
  EMT20919 273 YTCKICGRKFITSQAYGGHMSSH 295
               9*******************999 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.53E-5272300No hitNo description
PROSITE profilePS5015711.385273300IPR007087Zinc finger, C2H2
PROSITE patternPS000280275295IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MDPNGSYPNK VRSSESDAYI SPLHEALRGT TALPVSNDIL AFESLPSDSP SMVNSSLAPN  60
APLEPTMMLV NDSSMMPHHE NVGLAPLPPQ LSDTIINPLS MVNTIVPQPN NEEIHQDEHE  120
MFKHEDFLSN PLWNYADSYH HTYTSPMESP SFTSLLQTDP NSIVHTQLNT NGAMEDGSIS  180
DMPTMHVSEV NSLPYGFCCS PENIDPFTPN TILQQQNIQN GRLLYDASYG VPAPISPFMT  240
TSHVPREDKT PLVGPNGIFG SGILHGSTSL GNYTCKICGR KFITSQAYGG HMSSHAKERK  300
KQLQS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A453C3I20.0A0A453C3I2_AEGTS; Uncharacterized protein
TrEMBLM8BG290.0M8BG29_AEGTA; Uncharacterized protein
STRINGEMT209190.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP11492612