PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EMT20801 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family | G2-like | ||||||||
Protein Properties | Length: 242aa MW: 26449.4 Da PI: 5.5746 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 37.3 | 5.8e-12 | 214 | 238 | 1 | 25 |
G2-like 1 kprlrWtpeLHerFveaveqLGGse 25 k+r+rWt++LHerFve+v+qLGG++ EMT20801 214 KTRIRWTQDLHERFVECVNQLGGAD 238 68*********************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 1.4E-9 | 212 | 239 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence Send to blast |
MNTKKFRPPG DVVGSAALCD PSSPQQLSSS LHQEELENSA TSSQQHCAGC RLHEDYTPWS 60 ALAQSCLGTD NAAFDCAESL FDYPLGMLLM PIARTHYQYQ SSENDRCRPR PQRDAMETTP 120 AQLHKQPLPP PPQQQQERDH GLFSFSNAST TWSRGGEPKT CSFSPLVAAP DTILPAMENQ 180 KVPLPGNCMD APVTPVGDGA ARAPAAESST APRKTRIRWT QDLHERFVEC VNQLGGADSE 240 RS |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020153757.1 | 1e-179 | uncharacterized protein LOC109739088 | ||||
TrEMBL | M8CCG8 | 1e-180 | M8CCG8_AEGTA; Uncharacterized protein | ||||
STRING | EMT20801 | 1e-180 | (Aegilops tauschii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP6933 | 37 | 51 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06800.2 | 6e-11 | G2-like family protein |