PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EMT20411 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family | bZIP | ||||||||
Protein Properties | Length: 239aa MW: 26001.4 Da PI: 6.635 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 33 | 1.3e-10 | 112 | 157 | 5 | 50 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 kr +r NR +A+rsR RK+++i eLe+ v L+ e +aL ++ EMT20411 112 KRVKRILANRQSAQRSRVRKLQYISELERSVTGLQMEVSALSPRVA 157 8999*******************************99999987665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.8E-11 | 108 | 172 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.461 | 110 | 166 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.69E-11 | 112 | 166 | No hit | No description |
Pfam | PF00170 | 2.6E-9 | 112 | 160 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.5E-13 | 112 | 166 | No hit | No description |
CDD | cd14703 | 8.63E-23 | 113 | 163 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 115 | 130 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009555 | Biological Process | pollen development | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence Send to blast |
MAQLPPRAPS AGGQDWPVAG EFLGFAAARR GVHRRSASDP AAFLEAVPMD HILSGGGGDD 60 EFDRLDDEQL MSMFSNVDGG CDRPGFMDTG EAEEGTPSAG AMAAADGFGD PKRVKRILAN 120 RQSAQRSRVR KLQYISELER SVTGLQMEVS ALSPRVAFLD HQRSLLTVGN SHLRQRIAAL 180 AQDKIFKDAH QEALKEEIER LRQLFHHQKI KATGGTDMAT AASMQAKQEL LMCEGAAMR |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription regulator. {ECO:0000250}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By white light. {ECO:0000269|PubMed:18065552}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020168576.1 | 1e-175 | basic leucine zipper 19-like | ||||
Swissprot | Q6K3R9 | 1e-96 | BZP19_ORYSJ; Basic leucine zipper 19 | ||||
TrEMBL | A0A3B6MP61 | 1e-173 | A0A3B6MP61_WHEAT; Uncharacterized protein | ||||
TrEMBL | A0A453KCJ4 | 1e-173 | A0A453KCJ4_AEGTS; Uncharacterized protein | ||||
TrEMBL | R7WCS7 | 1e-173 | R7WCS7_AEGTA; Transcription factor RF2a | ||||
STRING | EMT20411 | 1e-174 | (Aegilops tauschii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1322 | 38 | 125 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42380.2 | 6e-68 | bZIP family protein |