PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT19599
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family GRAS
Protein Properties Length: 367aa    MW: 40712.9 Da    PI: 6.6429
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT19599genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS405.8e-13297365169
      GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppset 69 
               l+ lL+++A+av+++++  a++lL+ ++e++s dgd ++Rla+y++ +L+a la+ + ++yk l  ++t
  EMT19599 297 LRALLFHFAQAVAEDNHLFANELLKMIREHSSADGDCTERLAFYLADGLEACLAGIGGQVYKNLMERRT 365
               5789**********************************************************9977766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098510.781271367IPR005202Transcription factor GRAS
PfamPF035142.0E-10297365IPR005202Transcription factor GRAS
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    Send to blast
MAIEPLCDNL DAVAATDQPY DGEQLTIYNY DLTDPNSTVL SPANQASTYL LGGVTSRGLC  60
SVNSSLGQNQ FPIAAGGSPE HHQSRSNDAL HSISHMLMED VDERVDICQG EAALQATEQP  120
FRDILGQPLT TPLSPYICNR SLFLPNQPLT SVGRASGSSF PTLDCQRRGV EEATTFAPSI  180
HKLVIYLEKG ILSISQLTTK AKTGERSENA IFALADQREW DILQGRDHKH HAITTCAIIR  240
NENFDRVLLY GRKSFDQITK LRERMAATGN NNTLKGRSKG RQKLWARKQQ RKELVDLRAL  300
LFHFAQAVAE DNHLFANELL KMIREHSSAD GDCTERLAFY LADGLEACLA GIGGQVYKNL  360
MERRTSH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9341481e-58EU934148.1 Hordeum vulgare subsp. vulgare cultivar Druvis 1H(5) Mla region 206i20_T7 locus genomic sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020198293.10.0scarecrow-like protein 30
TrEMBLR7WG260.0R7WG26_AEGTA; Uncharacterized protein
STRINGEMT195990.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP150538118
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.15e-21SCARECROW-like 14