PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT19595
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family GRAS
Protein Properties Length: 719aa    MW: 81407.6 Da    PI: 7.7935
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT19595genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS354.12.1e-1083407111374
      GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
               l++lL++cA+av+++d+  a++lL+++++++s dgd +qRla+y++ +Laarla+ +s++y+ l  ++ts   +++ l a + f+  +P+ + sh  a qa
  EMT19595 340 LRTLLVNCAQAVAEHDHLVASELLKKIRQHSSADGDCTQRLAFYMADGLAARLAGIGSQVYRNLMERRTS---TTDWLDACSHFHASCPFDRTSHYFASQA 437
               6789************************************************************999998...7889999999****************** PP

      GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgE 200
               Il+  +g+ rvHi+Df+i+ GlQWp ++q +++++eg+p+lRiTg++ p++g    e++eetg+rLa++A+ ++vpf+++ ++a+r+e++++e+L+++++E
  EMT19595 438 ILDVSQGQPRVHIVDFGIGFGLQWPLMIQRFSQQEEGAPKLRITGIDVPQPGlhPCEMIEETGKRLADYANMFKVPFQYQGIAASRWETIKIEDLNIDEDE 538
               ***************************************************99999********************************************* PP

      GRAS 201 alaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvace 301
               +l++n+++++++l +e+ +++s rd+vLk++++++Pk++++   +    s+ F +rf e + +ys++fd+l+a++ +++++r+ +E+ l+g+++ n++ace
  EMT19595 539 VLIINCMFRMKNLGHETEAVNS-RDRVLKTMRRMNPKILILGTVNGLSCSPFFIQRFKEVMFHYSSMFDMLDANIRQDNKARKLIEKILFGQDALNIIACE 638
               **************99999999.****************************************************************************** PP

      GRAS 302 gaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
               gaer+er e++++W++r  +aGF+++p++  + k +  + +  + +++ v e++g+l++gWk+r L+++S W+
  EMT19595 639 GAERTERPESYRQWQARCLKAGFQQLPVDPAMLKIILQMKNLRSHEEFFVVEDRGWLLQGWKGRVLYAISKWK 711
               *****************************999888888888888899*************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098560.107314691IPR005202Transcription factor GRAS
PfamPF035147.2E-106340711IPR005202Transcription factor GRAS
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 719 aa     Download sequence    Send to blast
MAIEPLLADL DSASSSQQQL TVDSYDLSSP LFLAQPTTTG ASTYLHAAAT SPGLCNFNSS  60
LVQNQFQIAA RGSPEHRQIR SNDALHYISQ MLMEDVDETP VGVCQEEAAL QAAEKPFRDI  120
LGPVYPPATN WPSLHSNNET GNSHNSWTSR YKRLWSASFC NDYSSYSMLQ PLTNPLSPCT  180
CNRSLSLQKR PFISVGPTSR SGFPALHRQR GVEEATVAAP SIDKLVIYLE NGILSITKLT  240
TNAKVGERSE NAIFEVADPS DWDILEGRSN KHLAFTTCAI IRNENFDRIL LCYGRKSFEQ  300
ITRSQRGMAE EGSKSSMKGR SKGRQKLWQR KQPRRELVDL RTLLVNCAQA VAEHDHLVAS  360
ELLKKIRQHS SADGDCTQRL AFYMADGLAA RLAGIGSQVY RNLMERRTST TDWLDACSHF  420
HASCPFDRTS HYFASQAILD VSQGQPRVHI VDFGIGFGLQ WPLMIQRFSQ QEEGAPKLRI  480
TGIDVPQPGL HPCEMIEETG KRLADYANMF KVPFQYQGIA ASRWETIKIE DLNIDEDEVL  540
IINCMFRMKN LGHETEAVNS RDRVLKTMRR MNPKILILGT VNGLSCSPFF IQRFKEVMFH  600
YSSMFDMLDA NIRQDNKARK LIEKILFGQD ALNIIACEGA ERTERPESYR QWQARCLKAG  660
FQQLPVDPAM LKIILQMKNL RSHEEFFVVE DRGWLLQGWK GRVLYAISKW KPNETYDDK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5hyz_A6e-493447118375GRAS family transcription factor containing protein, expressed
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020171028.10.0scarecrow-like protein 34
TrEMBLR7WF600.0R7WF60_AEGTA; Uncharacterized protein
STRINGEMT195950.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP150538118
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-138GRAS family protein