PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT19013
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family HB-other
Protein Properties Length: 263aa    MW: 28350.4 Da    PI: 8.9802
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT19013genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox44.92e-1450118357
               --SS--HHHHHHHHHHHH..............HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
  Homeobox   3 kRttftkeqleeLeelFe..............knrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 
               kR   t++ql++Le+ +                ++yps+++r+eL+ k+gL++rq ++WF+ rR k++k
  EMT19013  50 KRMMKTPYQLDVLEQTYLafqrgfdssfsfraAEQYPSEAMRAELSVKIGLSDRQLQMWFCHRRLKDRK 118
               688889999999999988888999999999867**********************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466897.27E-1331118IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.2E-1534118IPR009057Homeodomain-like
PROSITE profilePS5007113.5445119IPR001356Homeobox domain
SMARTSM003894.6E-1347123IPR001356Homeobox domain
PfamPF000464.5E-1250118IPR001356Homeobox domain
CDDcd000861.62E-1250119No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    Send to blast
MDAAGAGDGP PREAPEERTP QTPAPPAVAA PASASGGAAG PSGSGEKPVK RMMKTPYQLD  60
VLEQTYLAFQ RGFDSSFSFR AAEQYPSEAM RAELSVKIGL SDRQLQMWFC HRRLKDRKPP  120
AKRQRRDQEG PATPVPVPPP VLPLQAMPLA STDLMMSAGS PYDEPLLPLT HSRRGAGRSS  180
AVPRISAPDI GRDIGRRYYE PLPVMLPPPV APMQFRQAEL RVITSVESQL GEPLREDGPV  240
LGVDFDPLPP GAFGAPIGTF PKI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020165782.11e-122homeobox-DDT domain protein RLT2-like isoform X1
RefseqXP_020165783.11e-122homeobox-DDT domain protein RLT2-like isoform X2
TrEMBLR7WB970.0R7WB97_AEGTA; Uncharacterized protein
STRINGEMT190130.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1674079
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44180.28e-36Homeodomain-like transcriptional regulator