PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT18702
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family bZIP
Protein Properties Length: 317aa    MW: 34403.8 Da    PI: 4.4897
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT18702genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.58.9e-11120171455
               XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
               +k+ rr ++NR +A +sR+RKk +++ Le+k+k Leae ++L   l+    e
  EMT18702 120 SKKKRRQMRNRDSAMKSRERKKSYVKDLETKSKYLEAECRRLSYALQCCAAE 171
               699************************************9998777665555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.4E-6116181IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.737119161IPR004827Basic-leucine zipper domain
PfamPF001701.2E-9121177IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.9E-12121180No hitNo description
SuperFamilySSF579591.48E-10121179No hitNo description
CDDcd147048.47E-14122173No hitNo description
PROSITE patternPS000360124139IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000165Biological ProcessMAPK cascade
GO:0002679Biological Processrespiratory burst involved in defense response
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006612Biological Processprotein targeting to membrane
GO:0006984Biological ProcessER-nucleus signaling pathway
GO:0009409Biological Processresponse to cold
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0009693Biological Processethylene biosynthetic process
GO:0009738Biological Processabscisic acid-activated signaling pathway
GO:0009867Biological Processjasmonic acid mediated signaling pathway
GO:0010200Biological Processresponse to chitin
GO:0010286Biological Processheat acclimation
GO:0010363Biological Processregulation of plant-type hypersensitive response
GO:0030968Biological Processendoplasmic reticulum unfolded protein response
GO:0031348Biological Processnegative regulation of defense response
GO:0043069Biological Processnegative regulation of programmed cell death
GO:0050832Biological Processdefense response to fungus
GO:0005634Cellular Componentnucleus
GO:0005789Cellular Componentendoplasmic reticulum membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    Send to blast
MDTDLDLDAL LASFAGESAA VSELLAPPPL DAAEAGGPEA EEEAAGAEPV DGISVDEFLD  60
TLFDGAEEGG EKGNGSEAEA GGSTDGDSRR GEDGVEVVTP ETEAEVVTPE TEVDGDDPIS  120
KKKRRQMRNR DSAMKSRERK KSYVKDLETK SKYLEAECRR LSYALQCCAA ENMALRQNML  180
KDRPIGAHTA MQESAVLSEL SELDVSELKS LHEMQPGLLA RRNLSCAKCN CFHFAEPLPL  240
VSLLWLVSIV CLFLTPGLPN RSLVAPRRAE RDLAMVAGKP SSDQPETLEL LLHGRRWRGT  300
RERIKLDTPP LRAAAAC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1120124KKKRR
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor involved in endoplasmic reticulum (ER) stress response (PubMed:21223397, PubMed:22050533, PubMed:22199238). Acts downstream of the ER stress sensors IRE1, BZIP39 and BZIP60 to activate BiP chaperone genes (PubMed:22050533, PubMed:22199238). {ECO:0000269|PubMed:21223397, ECO:0000269|PubMed:22050533, ECO:0000269|PubMed:22199238}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00019PBMTransfer from AT1G42990Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By dithiothreitol-induced endoplasmic reticulum (ER) stress response (PubMed:22050533, PubMed:21223397). Induced by salt stress (PubMed:22050533). {ECO:0000269|PubMed:21223397, ECO:0000269|PubMed:22050533}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3655051e-136AK365505.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2034K24.
GenBankAK3663281e-136AK366328.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2041P19.
GenBankAK3699571e-136AK369957.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2101P04.
GenBankAK3701491e-136AK370149.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2105L10.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020184631.11e-179bZIP transcription factor 50
SwissprotQ69XV02e-87BZP50_ORYSJ; bZIP transcription factor 50
TrEMBLR7W9830.0R7W983_AEGTA; BZIP transcription factor 60
STRINGEMT187020.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP69343750
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G42990.14e-11basic region/leucine zipper motif 60
Publications ? help Back to Top
  1. Wakasa Y, et al.
    Expression of ER quality control-related genes in response to changes in BiP1 levels in developing rice endosperm.
    Plant J., 2011. 65(5): p. 675-89
    [PMID:21223397]
  2. Lu SJ, et al.
    Conservation of IRE1-regulated bZIP74 mRNA unconventional splicing in rice (Oryza sativa L.) involved in ER stress responses.
    Mol Plant, 2012. 5(2): p. 504-14
    [PMID:22199238]