PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EMT18565 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family | bZIP | ||||||||
Protein Properties | Length: 222aa MW: 23104.1 Da PI: 10.8639 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 28.7 | 2.8e-09 | 117 | 161 | 5 | 49 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 +r rrk +NRe+ArrsR+RK+ +ee + +++L a N+ L+++l EMT18565 117 RRLRRKVSNRESARRSRARKQRHLEEQRAAAATLRAGNRHLAEKL 161 799***************************************987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 4.2E-6 | 110 | 162 | No hit | No description |
SMART | SM00338 | 0.0018 | 113 | 177 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.048 | 115 | 161 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 7.59E-6 | 117 | 164 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 120 | 135 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence Send to blast |
MALSDVDLDF EAFLAHLASG LDAPPPTQTS PVPALSSSPD LLPMLTSSPE AGLLSPAAPS 60 PLEVPMDTSS PSEGGLLTPG AVSPDLHMTT ASPEEGTSSG SAGTVAVAGP DDGDRERRLR 120 RKVSNRESAR RSRARKQRHL EEQRAAAATL RAGNRHLAEK LRVARARAGL VALANARLRA 180 QGQALSRRLD AARQALALRQ LYAAASASGG ALDMQALASL IR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 129 | 136 | RRSRARKQ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK370496 | 1e-149 | AK370496.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2111L04. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020169702.1 | 1e-147 | ocs element-binding factor 1-like | ||||
Refseq | XP_020183570.1 | 1e-147 | ocs element-binding factor 1-like | ||||
TrEMBL | R7WE70 | 1e-148 | R7WE70_AEGTA; Ocs element-binding factor 1 | ||||
STRING | EMT18565 | 1e-149 | (Aegilops tauschii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP15125 | 19 | 19 |