PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EMT18246

Organism

Aegilops tauschii

Taxonomic ID

37682

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops

Family

bZIP

Protein Properties

Length: 455aa MW: 49824.3 Da PI: 6.8797

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EMT18246	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	36.4	1.2e-11	202	230	5	33
CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLee 33 k +rr+++NReAAr+sR+RKka+i++Le EMT18246 202 KTTRRLAQNREAARKSRLRKKAYIQQLES 230 789************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	5.2E-7	198	261	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.071	200	244	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	4.0E-7	201	243	No hit	No description
CDD	cd14708	7.91E-21	202	254	No hit	No description
Pfam	PF00170	1.9E-8	202	238	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	7.2E-8	203	246	No hit	No description
PROSITE pattern	PS00036	0	205	220	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	2.3E-11	282	331	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 455 aa Download sequence Send to blast
MAMPTNSMPP AAFFSEQDGG GGGGAYFGEL EEALMHQAAT LSSSSGRMIS HSHSQQQTAT 60 ATSTDHPHHH HHHHHGHNHA MPFPSTVVDT ATAAAAAARP PPTLDIFPSW PLALHHHHTP 120 KEGSNVTADS TDSESSSKNN INMDSSDHHH QQQQQQQGMV GLVTVAGQFH QISQQQHHQH 180 QQQNMATSST HSDRTGKAVD PKTTRRLAQN REAARKSRLR KKAYIQQLES GKLKLAQLEQ 240 DLQRARSQGL LVGGAPGGNS SPGAAMFDVE YNRWLDDDSR RMIELRGGLH AHLPDGDLRA 300 IIDDTLTHYD ELFRLKSAAA RADVFHLITG ILEQSLQQAE EALTQGLEQL HQSLAITVAG 360 SGSLSDDTNM GSFMGDMAVA LGKLANLEGF VIQADNLRQQ TLHQMHRILT VRQAARCFLA 420 IGEYHNRLRA LSSLWASRPR EILMTDEGNC GELAY

Sequence ? help Back to Top

Protein Sequence Length: 455 aa Download sequence Send to blast

MAMPTNSMPP AAFFSEQDGG GGGGAYFGEL EEALMHQAAT LSSSSGRMIS HSHSQQQTAT  60
ATSTDHPHHH HHHHHGHNHA MPFPSTVVDT ATAAAAAARP PPTLDIFPSW PLALHHHHTP  120
KEGSNVTADS TDSESSSKNN INMDSSDHHH QQQQQQQGMV GLVTVAGQFH QISQQQHHQH  180
QQQNMATSST HSDRTGKAVD PKTTRRLAQN REAARKSRLR KKAYIQQLES GKLKLAQLEQ  240
DLQRARSQGL LVGGAPGGNS SPGAAMFDVE YNRWLDDDSR RMIELRGGLH AHLPDGDLRA  300
IIDDTLTHYD ELFRLKSAAA RADVFHLITG ILEQSLQQAE EALTQGLEQL HQSLAITVAG  360
SGSLSDDTNM GSFMGDMAVA LGKLANLEGF VIQADNLRQQ TLHQMHRILT VRQAARCFLA  420
IGEYHNRLRA LSSLWASRPR EILMTDEGNC GELAY

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional regulator involved in defense response. {ECO:0000250\|UniProtKB:Q7X993}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK370288	0.0	AK370288.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2108D19.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020146200.1	0.0	transcription factor TGAL4-like isoform X1
Swissprot	Q53Q70	1e-172	TGAL4_ORYSJ; Transcription factor TGAL4
TrEMBL	R7W8M3	0.0	R7W8M3_AEGTA; Putative Transcription factor HBP-1b(C1)
STRING	EMT18246	0.0	(Aegilops tauschii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4444	36	70

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08320.2	1e-104	bZIP family protein

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Chern M, et al. Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins. BMC Genomics, 2014. 15: p. 461 [PMID:24919709] Miyamoto K, et al. Overexpression of the bZIP transcription factor OsbZIP79 suppresses the production of diterpenoid phytoalexin in rice cells. J. Plant Physiol., 2015. 173: p. 19-27 [PMID:25462074]