PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EMT18001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family | bZIP | ||||||||
Protein Properties | Length: 176aa MW: 19242.3 Da PI: 9.6043 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 37 | 7.5e-12 | 81 | 128 | 5 | 52 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 +++rr+++NRe+ArrsR RK+ +++eL +++ L a N++L el++ EMT18001 81 RKTRRLASNRESARRSRVRKQRRLDELSSRAARLRAANQRLLVELNRV 128 689***************************************999985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.3E-10 | 77 | 141 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 4.1E-8 | 78 | 131 | No hit | No description |
PROSITE profile | PS50217 | 10.76 | 79 | 142 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.76E-8 | 81 | 130 | No hit | No description |
Pfam | PF00170 | 4.2E-9 | 81 | 127 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 84 | 99 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 176 aa Download sequence Send to blast |
MQRHGAACSI ACHHGAGVFV LPQVYDPRAT HGQYDLASLS DMVAPYTDYN GGNPAVGWAP 60 PEVDSVDDDG RAARRGNGDE RKTRRLASNR ESARRSRVRK QRRLDELSSR AARLRAANQR 120 LLVELNRVLA EHGRVARESA RLREEASELR GKLDGMGVDE ADDVAPQSTK GTGNTA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 93 | 99 | RRSRVRK |
2 | 93 | 100 | RRSRVRKQ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK365860 | 0.0 | AK365860.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2038F22. | |||
GenBank | AK372147 | 0.0 | AK372147.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2147D05. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020164231.1 | 1e-125 | basic leucine zipper 43-like | ||||
TrEMBL | A0A3B6QG43 | 1e-123 | A0A3B6QG43_WHEAT; Uncharacterized protein | ||||
TrEMBL | A0A453NNW4 | 1e-123 | A0A453NNW4_AEGTS; Uncharacterized protein | ||||
TrEMBL | R7W867 | 1e-123 | R7W867_AEGTA; Ocs element-binding factor 1 | ||||
STRING | EMT18001 | 1e-124 | (Aegilops tauschii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP12742 | 27 | 35 |