PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EMT17350

Organism

Aegilops tauschii

Taxonomic ID

37682

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops

Family

bZIP

Protein Properties

Length: 306aa MW: 33076.3 Da PI: 7.2607

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EMT17350	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	46.5	8e-15	254	296	5	47
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 +r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN++Lkk EMT17350 254 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLKK 296 79***************************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	7.1E-15	248	297	No hit	No description
SMART	SM00338	3.0E-11	250	305	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.702	252	297	IPR004827	Basic-leucine zipper domain
CDD	cd14707	1.48E-24	254	304	No hit	No description
SuperFamily	SSF57959	4.56E-11	254	297	No hit	No description
Pfam	PF00170	1.7E-12	254	296	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	257	272	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 306 aa Download sequence Send to blast
MASQSQAGGG GGGGYAGPGQ HGQAQGLARQ GSLYSLTLDE VQSQLTEPLL SMNLDELLKS 60 VFPDGVDPVG GVAGQSEPAL GLHRQGSITM PPELSKKTVD EVWKGIQDSP KRSGEEGSQR 120 RRERQPTFGE MTLEDFLVKA GVVAEGHLKD LIDLPANMGA VGRSVIEAAA PPSLNPGAHW 180 LQQYLEPQHP SMAGPFMASH LGPQPLSVAT GAIMEPIYPD GQITSPMLDA LSDPQTPRRK 240 RGASDGVTDK VVERRQKRMI KNRESAARSR ARKQAYTNEL ENKVSRLEEE NERLKKQKVV 300 SYFVSH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	107	112	DSPKRS

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	EU307112	0.0	EU307112.2 Triticum aestivum FD-like 2 protein mRNA, partial cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020181441.1	0.0	ABSCISIC ACID-INSENSITIVE 5-like protein 2
Swissprot	Q9LES3	9e-69	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	A0A452ZDU0	0.0	A0A452ZDU0_AEGTS; Uncharacterized protein
STRING	EMT17350	0.0	(Aegilops tauschii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2707	38	83

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	5e-64	ABA-responsive element binding protein 3

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]