PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT17033
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family ARR-B
Protein Properties Length: 404aa    MW: 43804 Da    PI: 4.3275
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT17033genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like22.52.5e-07163184122
   G2-like   1 kprlrWtpeLHerFveaveqLG 22 
               kpr  W +eLH++Fveav+q+G
  EMT17033 163 KPRTTWRNELHDKFVEAVSQIG 184
               79******************96 PP
2Response_reg26.43.5e-10118542107
                   HHESEEEEESSCTTSEHHHHHHHH.HHHT.......TTSEEEEEE.STTTHHHHHHHHHTTESEEEESS--HHHH CS
  Response_reg  42 kdpDlillDiempgmdGlellkei.reee.......pklpiivvt.ahgeeedalealkaGakdflsKpfdpeel 107
                    ++Dl++ D+ +++mdG++llk i  e +       p    i+v  a + +e +++ +  Ga ++l+Kp++ ++l
      EMT17033  11 DNFDLVVSDVYLSDMDGFKLLKLIdLEMDlpvivvlPLATTIMVRrADERPEAMKKGIAHGACQYLVKPVQAKHL 85 
                   45**********************55555745444422333445525555999999*************988765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011021.304193IPR001789Signal transduction response regulator, receiver domain
CDDcd001562.50E-10285No hitNo description
Gene3DG3DSA:3.40.50.23007.2E-164115No hitNo description
SuperFamilySSF521723.27E-124100IPR011006CheY-like superfamily
PfamPF000721.1E-61085IPR001789Signal transduction response regulator, receiver domain
Gene3DG3DSA:1.10.10.601.6E-6162187IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0005622Cellular Componentintracellular
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    Send to blast
MAHQMLSEGR DNFDLVVSDV YLSDMDGFKL LKLIDLEMDL PVIVVLPLAT TIMVRRADER  60
PEAMKKGIAH GACQYLVKPV QAKHLDIMWR HVMARRTPQP WNLSSSSRNA AAEKAQPTGG  120
PGGGEQDGAK STKRGWTKSH EHDEDGHDAN KENLSPNPST WKKPRTTWRN ELHDKFVEAV  180
SQIGIKSSGE EMASFDGDVA TNNSTSSVQV LNGDLAIDGN TSSVEMLNGD LSIDDNTSWV  240
EMLNGYLAMD GGTSLVEMPN GGVLPAQAQG TADQEAVDGQ LNIDSDDFLE AVVDSFSMDD  300
ILTTINMLNE DLLINNNISS VEMSNGNFAI NNNMSSVEMP NGNFAINNNT SSVEMLNVEA  360
TAQWSKSIVG FGATSGHVKD GDELPLGMFI NFFVKGVLVK LGLV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLN1R3S60.0N1R3S6_AEGTA; Uncharacterized protein
STRINGEMT170330.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP4973022
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.14e-27response regulator 2