PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT16587
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family TALE
Protein Properties Length: 712aa    MW: 79488.7 Da    PI: 5.6142
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT16587genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox27.26.5e-095115481954
               HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
  Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
               Fe   ++yp+ +e+  LA+++gLt +q+++WF N R +
  EMT16587 511 FEHflHPYPKDSEKLMLARQTGLTRSQISNWFINARVR 548
               664559******************************88 PP
2BELL119.91.1e-38374445172
      BELL   1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
               e+qelq+k akLl +l+eVd++Yk+y +q+q+v+ssF+++ag g+akpYt++Al++iSrhFrcLkdai +q+
  EMT16587 374 EKQELQNKMAKLLAMLDEVDRKYKHYFHQMQIVVSSFDMIAGSGAAKPYTAVALQTISRHFRCLKDAINDQV 445
               689******************************************************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF540013.43E-5691No hitNo description
SMARTSM005748.5E-55298443IPR006563POX domain
PfamPF075268.5E-50304441IPR006563POX domain
PROSITE profilePS5007112.357489552IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.602.4E-28491564IPR009057Homeodomain-like
SMARTSM003891.6E-9492556IPR001356Homeobox domain
CDDcd000865.87E-12492553No hitNo description
SuperFamilySSF466893.42E-17493558IPR009057Homeodomain-like
PfamPF059201.2E-17509548IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 712 aa     Download sequence    Send to blast
MSYACVRNFH FILLEIKLEQ GLVTVIDSRR KDPEEYAART KMLEKVWKTF TAEAPALPGE  60
LRFTHPKEPG NNYCGYYVCE FIRHTTYERG YSKKQLEAGQ LNFDWVDFTS GMQLLHNPGD  120
ERDPQTMYSP DTGNASYPVP SALGNLLYSN NASSGPYTEF SGIIQPQQNF MELHGHPSEH  180
SSSREPPNMV TSLTEQSSFA PVKDMRNEML MHFMDGAQSG GGGGDLIHND AHSSAQLDFG  240
LLNNPSSASV PSAPGQGLSL SLNTHILAPS YPYWSPKPDL LATQSYQGDE NGMKNMQSEA  300
SRAIRNSKYL KAAQELLDEI VSVWKSIKQN AQKDKVEAGK MDGKDADEVL KSEGVSSNPQ  360
ESTANAEPEI SAAEKQELQN KMAKLLAMLD EVDRKYKHYF HQMQIVVSSF DMIAGSGAAK  420
PYTAVALQTI SRHFRCLKDA INDQVNVIRK KLGEEDNSSG REGKLTRLRY IDQQLRQQRA  480
FQQYGMLQQN AWRPQRGLPE NSVSILRAWL FEHFLHPYPK DSEKLMLARQ TGLTRSQISN  540
WFINARVRLW KPMIEDMYKE ETGEAELDSN SSSDNLPRSK DKMASCEDKE DLKCSMSQGQ  600
AYQTGEFKAN MEMAGLTGAP SSFHNEANSD DGFMNLLLKD QRPGLQHAEN NLSAPNAPRP  660
GFTAGGEEDI YNTAAAHPGA GAAVASSDYE STNQLDQRQQ FEPSPLLHDF VA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrs_A4e-16498555158Homeobox protein Meis1
4xrs_B4e-16498555158Homeobox protein Meis1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3652800.0AK365280.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2033A23.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020149633.10.0BEL1-like homeodomain protein 7
RefseqXP_020149634.10.0BEL1-like homeodomain protein 7
RefseqXP_020149635.10.0BEL1-like homeodomain protein 7
RefseqXP_020149636.10.0BEL1-like homeodomain protein 7
RefseqXP_020149637.10.0BEL1-like homeodomain protein 7
RefseqXP_020149638.10.0BEL1-like homeodomain protein 7
RefseqXP_020149639.10.0BEL1-like homeodomain protein 7
TrEMBLR7W5Y90.0R7W5Y9_AEGTA; BEL1-like homeodomain protein 6
STRINGEMT165870.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP90138131
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34610.21e-115BEL1-like homeodomain 6