PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT16107
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family CAMTA
Protein Properties Length: 1030aa    MW: 114613 Da    PI: 6.2268
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT16107genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1178.86.5e-56211363117
      CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlL 102
               +e ++rwl+++ei++iL n++k++++ e+++rp+sgsl+L++rk++ryfrkDG+ w+kkkdgktv+E+hekLKvg+v+vl+cyYah+een++fqrr+ywlL
  EMT16107  21 QEaQNRWLRPTEICQILSNYKKFSIAPEPPNRPPSGSLFLFDRKILRYFRKDGHIWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQRRTYWLL 121
               5559************************************************************************************************* PP

      CG-1 103 eeelekivlvhylev 117
               ee + +ivlvhyle 
  EMT16107 122 EEGFMNIVLVHYLEI 136
               ************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143781.10316142IPR005559CG-1 DNA-binding domain
SMARTSM010763.2E-7719137IPR005559CG-1 DNA-binding domain
PfamPF038592.2E-5022135IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.101.6E-7440527IPR013783Immunoglobulin-like fold
PfamPF018332.8E-7441514IPR002909IPT domain
SuperFamilySSF812965.44E-18441526IPR014756Immunoglobulin E-set
SuperFamilySSF484031.51E-16618733IPR020683Ankyrin repeat-containing domain
CDDcd002041.61E-12619731No hitNo description
Gene3DG3DSA:1.25.40.205.9E-17628734IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029717.396639733IPR020683Ankyrin repeat-containing domain
PfamPF127963.3E-6645734IPR020683Ankyrin repeat-containing domain
SMARTSM002480.069672701IPR002110Ankyrin repeat
PROSITE profilePS500889.458672704IPR002110Ankyrin repeat
SMARTSM00248420711740IPR002110Ankyrin repeat
SuperFamilySSF525403.72E-8843896IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000151.5845867IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.627847875IPR000048IQ motif, EF-hand binding site
PfamPF006120.0055847866IPR000048IQ motif, EF-hand binding site
SMARTSM000150.0022868890IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.67869893IPR000048IQ motif, EF-hand binding site
PfamPF006126.5E-5870890IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009409Biological Processresponse to cold
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071275Biological Processcellular response to aluminum ion
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 1030 aa     Download sequence    Send to blast
MAEMHKYGLS NQPPDIPQIL QEAQNRWLRP TEICQILSNY KKFSIAPEPP NRPPSGSLFL  60
FDRKILRYFR KDGHIWRKKK DGKTVKEAHE KLKVGSVDVL HCYYAHGEEN ENFQRRTYWL  120
LEEGFMNIVL VHYLEIKGGK QSFSRSKEAE DSPACSNSFA SQSQVASQTM DAESPYSGQI  180
SEYEDAETGY QDENQARTAN ISNNFVTHHG IASVFNDVGA GLRSGSKTAL DSVHFGEPFP  240
EYPTGFTEPT LYSSVTTMGS NNLDDNSRLE TLMTEALYTN NLTQKETDAL SAAGMTSSQR  300
RPPEAPVHSG RLKRADIVKR GLKDWNITKE LAMDRGAWKL AIHVHNDSYT DGSMGYPLLK  360
QSSLDLFKIE PNGLKKFDSF SKWMSDELAA DLDIKSTSDA FWSSTETVNV ADGSSMSIPM  420
NEQLDAYVVS PSLSQDQLFS IIDVSPSWAY TGSQNKVLIT GTFLTNKEHV ENCKWSCMFG  480
DVEVPVEVLA DGSLRCYTPV HQSGRVPFYV TCSNRVACSE VREFEFHDSE TQHMEAADPH  540
ITGINEMHLH IRLEKLLSLG PDDYEKYVMS GGNEKSELIS TIGSLMLDDK FTNLSAPSDE  600
EFSAAQDKNL EKSVKDKLYY WLIHKIHDDG KGPNVLGKEG QGVIHLVAAL GYDWAIRPII  660
AAGVHVNFRD VRGWTALHWA ASCGRERTVG ALITNGAAAG ALTDPTPHFL SGRTPADLAS  720
DNGHKGIAGF LAESALTSHL SALTLKEAKG CNVEEICGSA EADGFAEPTS AQLSRQDSQA  780
ESLKDSLSAV RKSTLAASKI FQAFRVESFH RKKVVEYGDD DCGLSDERTL SLVSLKNTKS  840
GQNDMPHSAA VRIQNKFRGW KGRKEFMIIR QKIIKIQAHI RGHQVRRNYK KVIWSVGIVE  900
KVILRWRRKG RGLRGFQPDK QLEGPSSQIQ PAEGGSAEAE DEYDFLKDGR KQAEGRLQRS  960
LARVKSMTQY PEAREQYSRL QACVTELQES KAIQDKMLSD AAGGDGGDFM VDLEDLCADE  1020
LLDTPMSTIL
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00043PBMTransfer from AT5G64220Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020196708.10.0calmodulin-binding transcription activator 2-like isoform X1
TrEMBLN1QYH50.0N1QYH5_AEGTA; Calmodulin-binding transcription activator 2
STRINGEMT161070.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP60838140
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64220.20.0Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains