PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EMT14894

Organism

Aegilops tauschii

Taxonomic ID

37682

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops

Family

G2-like

Protein Properties

Length: 2213aa MW: 233112 Da PI: 8.6793

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EMT14894	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	97.5	9.5e-31	1952	2006	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+WtpeLHerF +av++LGG++kAtPk+i+++m+++gLtl+h+kSHLQk+Rl EMT14894 1952 KPRLKWTPELHERFADAVKKLGGPDKATPKAIMRVMGIPGLTLYHLKSHLQKFRL 2006 79****************************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF117289	7.06E-13	21	270	No hit	No description
SuperFamily	SSF117289	7.06E-13	335	495	No hit	No description
PROSITE profile	PS51294	10.742	1949	2009	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	9.7E-29	1950	2007	IPR009057	Homeodomain-like
SuperFamily	SSF46689	3.4E-15	1951	2007	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	2.3E-22	1952	2007	IPR006447	Myb domain, plants
Pfam	PF00249	1.2E-8	1954	2004	IPR001005	SANT/Myb domain
Pfam	PF14379	6.6E-8	2050	2073	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009793	Biological Process	embryo development ending in seed dormancy
GO:0010070	Biological Process	zygote asymmetric cell division
GO:0005634	Cellular Component	nucleus
GO:0005739	Cellular Component	mitochondrion
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 2213 aa Download sequence Send to blast
MAAPRELDLS DEVEGEMDGT TDFVFRLVGD PIPVLPPASA PLPLFDLQSP PARPLAVSDR 60 HAAVFLAHPN GFIAARTKAL IEASKEAREK GKASTRCAQD CCVTDVPLPG VTLLALSRDQ 120 SVLAACTGSE IQFFSATSLL TDKDIKPSSS CSMGRSGTVK DFKWLDNAYI VLSNGGLLSH 180 GSLGQGLKDI MENVDAVCHL SEIYVVDCSK DGNHIAVARK NSLRILSPDL KETCCMALLF 240 QSWPDSDSEG TDIKVDSIGW VRDDSIVVGC VRLNEESNEE GYLVQVIRSG GDTFFEERKH 300 PLSHTVPAAK EISGLLDVVI ISILSLTCRL FVMKTNLLKW QLSLVTPWEQ SPLVNYLHSS 360 SKPVVFSYDV FGGIMDDILP SGVGPNLLLG YLHRWDLLVV TNKKSTDDHI SLLKWPSKTD 420 EERTVVYLEM VEDKYSPRID LQENGDDNVI LGFGVENVSL FQKITVLVGP EQKEVAPQHL 480 LLYLTSEGKL IIYYLARISD PSDLPQTSLS TIEDSNVNKQ ISPATASNKD LTPSVTSSMA 540 KSLLAGPGAS SAPAEKDQHG SGDAKSSFPI SNSKDIAAGS SLLISSDKKP LDTKQVNTAS 600 PFAPPSSSAP TGNMKPGMPF SFSTGNNVGL NSTGSKGSSE PVSSWQPNTS GSFVSSQLGK 660 GGFDSAKPLG AFGGSQNATK SGGSLSFKSS VFSSDGSVPV KTAERDGASS FGSYPAQTSY 720 TTERKVLGSS AGLSSVPSLS ISPNKPVGAS SAGFGAGNLE VPPVSRGSPL PQQIIGKSPN 780 NRNHMSADSK NFKLGTMFDT QQDLSKKIYS INDMTEELDT LLSYIEKDGG FRDACMTLQQ 840 RPLSVLEGDL QNLLELLQVF KNKVEEQCSK AEDLRNKMFQ VSARQAYMKG ILTQSSDTQY 900 WDIWNRQNLS PEFEAKRQNI LKANQNLTNQ LVELERHFNN LEMNKFGETG RVASSRRAVY 960 SNKSRSSQTQ LSSVYNALNS QLAAAEQLSE CLSKQISALN ISSPSKKRGA VTKELFESIG 1020 LAHMADAAKF SGGTPSKLIQ RFPSTKEHTK GMLGPSKSAE PETARRRRES LDMSLASLEP 1080 QKTTVKRIAQ QQRLKISSDL PFRSNKKMFD SQMAAISQET FGGSPSSSIV ESYTSRVRSP 1140 IEVLDEKTKP SGPQGNSLFK WVKEPAGSSQ GSEQKHLDLS GRMKSADQSS KLTPSSPASF 1200 SYTQKDARDR TSTPNVASLG AMHTVPKSNT LTFKTNIAPK TNANTRPDMS PSVSSPMPVK 1260 TLSGDSGAGF TLTTKNRYSD QDVPSFGSMK GFGISPQNTG VNKPSLSSEP SKPVVLHGKT 1320 FQVSGVSDTM QNSAKASPQV AFSPTSQSSS FPIMSGASSS AASLLSTMQA SAAKTSDVSS 1380 PTVSSTLPPQ ESAPKTHPTV PEGTVSCSLP SIPTPVKESL PDLNKNASKP EVVTPEVTGT 1440 TVSVSATLTG VPTSESKTAL LPVTNSSLSS NPPSIPVPKV VPGATESAVV TSTRKDAGPS 1500 NLSSDEDEMD EERPSASADL NLGALSGFGL GSAPSSSPKK SNPFGSAFGT SESKSSSSPF 1560 TLTTSPGQLF RPASLSIPSS QPAQPSQSSS SSTFSSAFSS GLGGFGQSAQ VGSGQQSGFG 1620 QSAQIGAGQQ AGFGQPAQIQ SGFGQPAQVG AAQQSGFGQP AQIGGGQQSG FGQPAQLGAQ 1680 QALGSVLGSF GQSRQLGGGF GGFASSSSGA FASAPSSNSG FAGAAAGGGF LRLFISVGGG 1740 FAAAATGGGF ASLASKSGGG FAAAASSSGG FGGAAQGGGF GGAAQGGGFG GAAQGGGFGG 1800 GLAIAGYLVS KRYLERNWSL RLPGAYTGMK NKSIRCQALV NKQRPKLNAE GIRQVLGTEH 1860 MHARTPHSIT GTPTEVEPSQ PTVKLRRRLQ SSHPAFLWEM YHQQQQQFHD HRQHMSSRPS 1920 LSPENKFFMK GQGGAGAGGG GDAGLILSTD AKPRLKWTPE LHERFADAVK KLGGPDKATP 1980 KAIMRVMGIP GLTLYHLKSH LQKFRLSKNL QAQANAVHAK NVYGFGTATD KACEGRGSPA 2040 DHLNRETNTS RHLQLRIEAQ GKYLHSVLEK AQEALGKQHV VAGLEAAEPT QRLPELASSV 2100 RRGLLQNDGS ADDSCLTASE DILSMGLSAS ATRRGCGAPF ETSASASREE DGECYLFLGK 2160 PEGRREVRRD GCSGGAAFGT AAELDLSIGV VAASSRRRPD GGERLDLNGS GWN

Sequence ? help Back to Top

Protein Sequence Length: 2213 aa Download sequence Send to blast

MAAPRELDLS DEVEGEMDGT TDFVFRLVGD PIPVLPPASA PLPLFDLQSP PARPLAVSDR  60
HAAVFLAHPN GFIAARTKAL IEASKEAREK GKASTRCAQD CCVTDVPLPG VTLLALSRDQ  120
SVLAACTGSE IQFFSATSLL TDKDIKPSSS CSMGRSGTVK DFKWLDNAYI VLSNGGLLSH  180
GSLGQGLKDI MENVDAVCHL SEIYVVDCSK DGNHIAVARK NSLRILSPDL KETCCMALLF  240
QSWPDSDSEG TDIKVDSIGW VRDDSIVVGC VRLNEESNEE GYLVQVIRSG GDTFFEERKH  300
PLSHTVPAAK EISGLLDVVI ISILSLTCRL FVMKTNLLKW QLSLVTPWEQ SPLVNYLHSS  360
SKPVVFSYDV FGGIMDDILP SGVGPNLLLG YLHRWDLLVV TNKKSTDDHI SLLKWPSKTD  420
EERTVVYLEM VEDKYSPRID LQENGDDNVI LGFGVENVSL FQKITVLVGP EQKEVAPQHL  480
LLYLTSEGKL IIYYLARISD PSDLPQTSLS TIEDSNVNKQ ISPATASNKD LTPSVTSSMA  540
KSLLAGPGAS SAPAEKDQHG SGDAKSSFPI SNSKDIAAGS SLLISSDKKP LDTKQVNTAS  600
PFAPPSSSAP TGNMKPGMPF SFSTGNNVGL NSTGSKGSSE PVSSWQPNTS GSFVSSQLGK  660
GGFDSAKPLG AFGGSQNATK SGGSLSFKSS VFSSDGSVPV KTAERDGASS FGSYPAQTSY  720
TTERKVLGSS AGLSSVPSLS ISPNKPVGAS SAGFGAGNLE VPPVSRGSPL PQQIIGKSPN  780
NRNHMSADSK NFKLGTMFDT QQDLSKKIYS INDMTEELDT LLSYIEKDGG FRDACMTLQQ  840
RPLSVLEGDL QNLLELLQVF KNKVEEQCSK AEDLRNKMFQ VSARQAYMKG ILTQSSDTQY  900
WDIWNRQNLS PEFEAKRQNI LKANQNLTNQ LVELERHFNN LEMNKFGETG RVASSRRAVY  960
SNKSRSSQTQ LSSVYNALNS QLAAAEQLSE CLSKQISALN ISSPSKKRGA VTKELFESIG  1020
LAHMADAAKF SGGTPSKLIQ RFPSTKEHTK GMLGPSKSAE PETARRRRES LDMSLASLEP  1080
QKTTVKRIAQ QQRLKISSDL PFRSNKKMFD SQMAAISQET FGGSPSSSIV ESYTSRVRSP  1140
IEVLDEKTKP SGPQGNSLFK WVKEPAGSSQ GSEQKHLDLS GRMKSADQSS KLTPSSPASF  1200
SYTQKDARDR TSTPNVASLG AMHTVPKSNT LTFKTNIAPK TNANTRPDMS PSVSSPMPVK  1260
TLSGDSGAGF TLTTKNRYSD QDVPSFGSMK GFGISPQNTG VNKPSLSSEP SKPVVLHGKT  1320
FQVSGVSDTM QNSAKASPQV AFSPTSQSSS FPIMSGASSS AASLLSTMQA SAAKTSDVSS  1380
PTVSSTLPPQ ESAPKTHPTV PEGTVSCSLP SIPTPVKESL PDLNKNASKP EVVTPEVTGT  1440
TVSVSATLTG VPTSESKTAL LPVTNSSLSS NPPSIPVPKV VPGATESAVV TSTRKDAGPS  1500
NLSSDEDEMD EERPSASADL NLGALSGFGL GSAPSSSPKK SNPFGSAFGT SESKSSSSPF  1560
TLTTSPGQLF RPASLSIPSS QPAQPSQSSS SSTFSSAFSS GLGGFGQSAQ VGSGQQSGFG  1620
QSAQIGAGQQ AGFGQPAQIQ SGFGQPAQVG AAQQSGFGQP AQIGGGQQSG FGQPAQLGAQ  1680
QALGSVLGSF GQSRQLGGGF GGFASSSSGA FASAPSSNSG FAGAAAGGGF LRLFISVGGG  1740
FAAAATGGGF ASLASKSGGG FAAAASSSGG FGGAAQGGGF GGAAQGGGFG GAAQGGGFGG  1800
GLAIAGYLVS KRYLERNWSL RLPGAYTGMK NKSIRCQALV NKQRPKLNAE GIRQVLGTEH  1860
MHARTPHSIT GTPTEVEPSQ PTVKLRRRLQ SSHPAFLWEM YHQQQQQFHD HRQHMSSRPS  1920
LSPENKFFMK GQGGAGAGGG GDAGLILSTD AKPRLKWTPE LHERFADAVK KLGGPDKATP  1980
KAIMRVMGIP GLTLYHLKSH LQKFRLSKNL QAQANAVHAK NVYGFGTATD KACEGRGSPA  2040
DHLNRETNTS RHLQLRIEAQ GKYLHSVLEK AQEALGKQHV VAGLEAAEPT QRLPELASSV  2100
RRGLLQNDGS ADDSCLTASE DILSMGLSAS ATRRGCGAPF ETSASASREE DGECYLFLGK  2160
PEGRREVRRD GCSGGAAFGT AAELDLSIGV VAASSRRRPD GGERLDLNGS GWN

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4r_A	1e-18	1952	2008	1	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	1e-18	1952	2008	1	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	1e-18	1952	2008	1	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	1e-18	1952	2008	1	57	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK362598	0.0	AK362598.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2008K07.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020161187.1	0.0	nuclear pore complex protein NUP214
TrEMBL	N1QX04	0.0	N1QX04_AEGTA; Myb family transcription factor APL
STRING	EMT14894	0.0	(Aegilops tauschii)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	5e-49	G2-like family protein