PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT14569
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family NAC
Protein Properties Length: 402aa    MW: 44356.6 Da    PI: 4.6131
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT14569genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM91.71.2e-28241582126
       NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeek.ewyfFskrdkkyatgkrknratk.sgyWkatgkdkevlsk.kgel 99 
                pG+rF Ptd+el+ +yL+ k++g++ ++ + +++ d+y  +P+ L +++  + +  wy F++r++kya+g r++r+t  +g+Wk+ gk+++v+   ++++
  EMT14569  24 VPGVRFVPTDQELILFYLRSKLRGDPPPT-SLVRDDDVYAEHPQILTTRLGPSVEdYWYVFTQRSRKYAKGGRPSRSTGdTGRWKSVGKNTPVTYGkEKAT 123
               59************************999.88**************96555444449*******************66549************98646777 PP

       NAM 100 vglkktLvfy........kgrapkgektdWvmhey 126
               +g +++L++         + ++++ ekt+W m e+
  EMT14569 124 IGFRNSLAYEvfvyddggDSKKKRIEKTEWKMMEF 158
               *******9987778877667888899********9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.31E-3522187IPR003441NAC domain
PROSITE profilePS5100535.94523187IPR003441NAC domain
PfamPF023651.3E-1625158IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 402 aa     Download sequence    Send to blast
MLLDASPSSQ QQPGEAPLYP YLHVPGVRFV PTDQELILFY LRSKLRGDPP PTSLVRDDDV  60
YAEHPQILTT RLGPSVEDYW YVFTQRSRKY AKGGRPSRST GDTGRWKSVG KNTPVTYGKE  120
KATIGFRNSL AYEVFVYDDG GDSKKKRIEK TEWKMMEFVD VDSNRPVSSD SNFMLLNDWV  180
LCRITRKPEK KKGEEEDPGA SPADEVVEEE EEHEPSSMML VDEPLTDTSP DTSQQAQATA  240
PTGLLRNGAN WSDSTADSQV QGSGSGSGAD PQQTADDDPF DLPDLEPSLS VNSFDHAFGF  300
RPDPWAWNLY YQEATDTDSP GSRLRTPSDP DPIEPPSEPP AAPQPRDVVT DPPSSADDGR  360
LEHAKAIRKR KEHARASGDD AGKKGNAAVK KSSGRAKQDG QN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A1e-182518719165NO APICAL MERISTEM PROTEIN
1ut4_B1e-182518719165NO APICAL MERISTEM PROTEIN
1ut7_A1e-182518719165NO APICAL MERISTEM PROTEIN
1ut7_B1e-182518719165NO APICAL MERISTEM PROTEIN
4dul_A1e-182518719165NAC domain-containing protein 19
4dul_B1e-182518719165NAC domain-containing protein 19
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703060.0HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A3B6GX710.0A0A3B6GX71_WHEAT; Uncharacterized protein
STRINGEMT145690.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP160681414
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.24e-24NAC domain containing protein 47