PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EMT14510

Organism

Aegilops tauschii

Taxonomic ID

37682

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops

Family

ERF

Protein Properties

Length: 333aa MW: 37054.9 Da PI: 7.1985

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EMT14510	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	43.2	9.9e-14	75	123	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 + G+r+++ r rW AeIrdp + r +lg+f +aeeAa+a++ + +++g EMT14510 75 FMGIRQRS-RARWGAEIRDPI----KgVRLWLGTFNSAEEAARAYDVEACRIHG 123 78*999.8*****72....46**********************998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00380	9.8E-31	74	137	IPR001471	AP2/ERF domain
CDD	cd00018	5.57E-28	74	132	No hit	No description
PROSITE profile	PS51032	20.033	74	131	IPR001471	AP2/ERF domain
Gene3D	G3DSA:3.30.730.10	1.2E-25	74	132	IPR001471	AP2/ERF domain
SuperFamily	SSF54171	1.11E-17	74	132	IPR016177	DNA-binding domain
PRINTS	PR00367	7.0E-6	75	86	IPR001471	AP2/ERF domain
Pfam	PF00847	1.9E-6	75	122	IPR001471	AP2/ERF domain
PRINTS	PR00367	7.0E-6	97	113	IPR001471	AP2/ERF domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence Send to blast
MENHYEGLEV ESGDSDLELG RDGVADKDNN HKVVEIKPLA AVRMSLSKDD LSTMTTTDFD 60 GPTQRSAKRK SKNQFMGIRQ RSRARWGAEI RDPIKGVRLW LGTFNSAEEA ARAYDVEACR 120 IHGKKAKINF PEEPKLPQKS RAPPASPKVP KPSAAHEHSF IPAFNNLVNQ NAFFYPSAHF 180 ASKQPLVQPE NVPFVPPMST IAPVEAPVMN MYSDRGSNSF GFSKLGWKYH TKTPDISSIA 240 PISTIVEGAE PVLVKNNTYN SLVPPVMENN VVNFEPWMRY LMDDRVDEMI DSLLNFDVPR 300 DVVSNRTFGA SMPCPSVANF SEGSKPCISG QRE

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcriptional activator that may be involved in defense signaling pathway. Binds in vitro to the DNA sequence 5'-AGCCGCC-3' of the GCC-box element found in pathogenesis-related (PR) gene promoters. The transcriptional activation is enhanced in vitro by the presence of MPK12/BWMK1. {ECO:0000269\|PubMed:12913152}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020194339.1	1e-155	ethylene-responsive transcription factor 1-like
Swissprot	Q6K7E6	1e-107	ERF1_ORYSJ; Ethylene-responsive transcription factor 1
TrEMBL	R7W7T4	0.0	R7W7T4_AEGTA; Ethylene-responsive transcription factor 1
STRING	EMT14510	0.0	(Aegilops tauschii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1039	38	134

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72360.1	3e-27	ERF family protein

Publications ? help Back to Top
Kim CY, et al. Identification of rice blast fungal elicitor-responsive genes by differential display analysis. Mol. Plant Microbe Interact., 2000. 13(4): p. 470-4 [PMID:10755311] Koo SC, et al. OsBWMK1 mediates SA-dependent defense responses by activating the transcription factor OsWRKY33. Biochem. Biophys. Res. Commun., 2009. 387(2): p. 365-70 [PMID:19607808] Iwamoto M,Takano M Phytochrome-regulated EBL1 contributes to ACO1 upregulation in rice. Biotechnol. Lett., 2011. 33(1): p. 173-8 [PMID:20872166] Serra TS, et al. OsRMC, a negative regulator of salt stress response in rice, is regulated by two AP2/ERF transcription factors. Plant Mol. Biol., 2013. 82(4-5): p. 439-55 [PMID:23703395] Jisha V, et al. Overexpression of an AP2/ERF Type Transcription Factor OsEREBP1 Confers Biotic and Abiotic Stress Tolerance in Rice. PLoS ONE, 2015. 10(6): p. e0127831 [PMID:26035591] Lourenço TF, et al. The Rice E3-Ubiquitin Ligase HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENE1 Modulates the Expression of ROOT MEANDER CURLING, a Gene Involved in Root Mechanosensing, through the Interaction with Two ETHYLENE-RESPONSE FACTOR Transcription Factors. Plant Physiol., 2015. 169(3): p. 2275-87 [PMID:26381316]