PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EMT13771

Organism

Aegilops tauschii

Taxonomic ID

37682

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops

Family

bZIP

Protein Properties

Length: 214aa MW: 22720.9 Da PI: 9.0075

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EMT13771	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	23.3	1.4e-07	71	113	21	63
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 21 RqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 R RKk+++ e ++ v +L+aeN L++e+e+l+ + +l +e+ EMT13771 71 RSRKKMRLPEVKQLVLSLSAENAGLRQEMESLQRACTALSKEN 113 789************************************9987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	3.0E-5	70	110	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 214 aa Download sequence Send to blast
MAEDGDCCVA VAVAEAAGII CSLRAADLAG SFRGNSFTPN HSRSWGAVGS TGGARRPLIL 60 PVPPARIAGQ RSRKKMRLPE VKQLVLSLSA ENAGLRQEME SLQRACTALS KENGRLEVVS 120 LSMPLAGVPG STAAALSTII HEAWYKAGAF VLVKQAEEDP TRLEHSSSSS KRKRIRSEEE 180 ERRQTKPQKA DGGFVLPDLN IPAQDVADAP AAVP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	70	76	RSRKKMR

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK373881	5e-78	AK373881.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv3046D15.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020196993.1	2e-57	uncharacterized protein LOC109782791
Refseq	XP_020196994.1	2e-57	uncharacterized protein LOC109782792
TrEMBL	R7W2U5	1e-153	R7W2U5_AEGTA; Uncharacterized protein
STRING	EMT13771	1e-154	(Aegilops tauschii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3790	29	51