PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EMT13304 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family | ARR-B | ||||||||
Protein Properties | Length: 218aa MW: 24079.5 Da PI: 8.6831 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 20.2 | 1.3e-06 | 192 | 212 | 1 | 21 |
G2-like 1 kprlrWtpeLHerFveaveqL 21 k++++Wt e+He Fv+av+qL EMT13304 192 KKKVEWTLEMHELFVNAVTQL 212 6899****************9 PP | |||||||
2 | Response_reg | 44.8 | 6.6e-16 | 21 | 125 | 1 | 104 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTT..SEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempg..mdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl vdD+p+ ++ l+q+l++ gy ev++ +++ +al+ ++++ +D i++ + g mdG+ l+k+ ++ + i+++++++++e++++ ++ G EMT13304 21 VLAVDDDPVCLQTLTQMLRRGGY-EVTASASPADALKEVEKNPdgIDFIMTVAQTRGrgMDGVGLVKRVGKRY--PVILMFSGNETMETRERGMQEG 114 799********************.999999999999999888889****99988877779*********6666..699999**************** PP ESEEEESS--H CS Response_reg 94 akdflsKpfdp 104 a Kp EMT13304 115 ACYLMDKPLRD 125 ***99999765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF52172 | 9.96E-20 | 17 | 144 | IPR011006 | CheY-like superfamily |
Gene3D | G3DSA:3.40.50.2300 | 1.7E-22 | 17 | 148 | No hit | No description |
SMART | SM00448 | 5.6E-11 | 19 | 132 | IPR001789 | Signal transduction response regulator, receiver domain |
PROSITE profile | PS50110 | 26.808 | 20 | 136 | IPR001789 | Signal transduction response regulator, receiver domain |
Pfam | PF00072 | 3.3E-12 | 21 | 125 | IPR001789 | Signal transduction response regulator, receiver domain |
CDD | cd00156 | 6.49E-14 | 22 | 122 | No hit | No description |
Gene3D | G3DSA:1.10.10.60 | 4.6E-5 | 190 | 213 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0000160 | Biological Process | phosphorelay signal transduction system | ||||
GO:0005622 | Cellular Component | intracellular | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence Send to blast |
MANGDKDMAT TELMETEGLK VLAVDDDPVC LQTLTQMLRR GGYEVTASAS PADALKEVEK 60 NPDGIDFIMT VAQTRGRGMD GVGLVKRVGK RYPVILMFSG NETMETRERG MQEGACYLMD 120 KPLRDVHIYF IWQQVVRWRR KAAGAATENP NPRHTQGVHL DDTPRKRGQG LNDSNKGKGA 180 SEGGLQLGTT KKKKVEWTLE MHELFVNAVT QLKTTGGA |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020163012.1 | 1e-162 | two-component response regulator ORR21-like | ||||
TrEMBL | A0A453MPZ4 | 1e-160 | A0A453MPZ4_AEGTS; Uncharacterized protein | ||||
TrEMBL | N1QXY6 | 1e-160 | N1QXY6_AEGTA; Two-component response regulator ARR12 | ||||
STRING | EMT13304 | 1e-161 | (Aegilops tauschii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP19506 | 2 | 3 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67710.1 | 2e-21 | response regulator 11 |