PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT11923
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family HB-other
Protein Properties Length: 307aa    MW: 33037.8 Da    PI: 6.5648
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT11923genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.52.5e-09761092154
               HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
  Homeobox  21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 
               ++ryps  ++  LA+++gL+ +qV++WF N R +
  EMT11923  76 RCRYPSDVDKHILARQTGLSRSQVSNWFINARVR 109
               69******************************88 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003891.4E-561117IPR001356Homeobox domain
PROSITE profilePS5007110.83571113IPR001356Homeobox domain
SuperFamilySSF466891.88E-1371120IPR009057Homeodomain-like
CDDcd000861.22E-1075114No hitNo description
Gene3DG3DSA:1.10.10.602.6E-1777119IPR009057Homeodomain-like
PfamPF059201.3E-1279109IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    Send to blast
MDAAELQKLK AKLYTMIEEE LHQLLGNLKG CRRVEWHSQF HYGLPKEGSW EQHSGGDSLL  60
GLTVRFWKPL FLRLARCRYP SDVDKHILAR QTGLSRSQVS NWFINARVRL WKPMVEEMYA  120
EEMKDKEEGS GGDGGGQSAQ QAGDLANPNP VAGSYASEGR GEQKPTRAQL HQLHDAGSLA  180
SVVSIGQSTD PQGLNFGMMD QLDFEAYEAA TAGFGNGVSL TLGLQHQQQQ QQHQHHGGVN  240
VAAFAAASPS SSSAAHGGAA EFLFMAGEGV HPSANGQFGA GMGSGADVAS QYHRGLGGFH  300
LLRDLAG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3584090.0AK358409.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1076A02.
GenBankAK3591120.0AK359112.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1089L06.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020160993.11e-124homeobox protein BEL1 homolog
TrEMBLM8C9W80.0M8C9W8_AEGTA; Homeobox BEL1-like protein
STRINGEMT119230.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP4933922
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41410.13e-25TALE family protein