PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT10947
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family AP2
Protein Properties Length: 348aa    MW: 37916.3 Da    PI: 5.9613
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT10947genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP234.64.7e-1181137155
       AP2   1 sgykGVrwdkkrgrWvAeIrd.pse.ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
               s+y+GV++ k++g+++A+++d  s+  g krk  + g++ t+e Aa+a++ a++k++g
  EMT10947  81 SRYHGVTRLKWSGKYEAHLWDnTSQvEGrKRKGKH-GSYVTEENAARAHDLAALKYWG 137
               79*******************55558777778888.999999*************987 PP
2AP246.68.4e-15182235155
       AP2   1 sgykGVrwdkkrgrWvAeIrdpse.ngkr.krfslgkfgtaeeAakaaiaarkkleg 55 
               s y+GV+++k +g+W A+I    e +    k ++lg+f t+ eAa+a++ a+ +l+g
  EMT10947 182 SSYRGVTRRK-DGKWQARIGRIGEsR--DtKDIYLGTFETEVEAAEAYDLAAIQLRG 235
               67*****999.9******99953323..36**********99************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000189.30E-1281149No hitNo description
PfamPF008476.2E-881137IPR001471AP2/ERF domain
SuperFamilySSF541714.77E-1181147IPR016177DNA-binding domain
PROSITE profilePS5103215.77882147IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.5E-982147IPR001471AP2/ERF domain
SMARTSM003801.0E-1182153IPR001471AP2/ERF domain
PfamPF008471.8E-10182235IPR001471AP2/ERF domain
CDDcd000181.63E-21182245No hitNo description
SuperFamilySSF541712.75E-17182245IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.108.4E-19183243IPR001471AP2/ERF domain
PROSITE profilePS5103218.36183243IPR001471AP2/ERF domain
SMARTSM003803.3E-27183249IPR001471AP2/ERF domain
PRINTSPR003675.1E-8184195IPR001471AP2/ERF domain
PRINTSPR003675.1E-8225245IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    Send to blast
MATTVQPHSP DPTAITTTPA PPPPPSPPRQ ENPTAAGEGV EIAALDEQPA AVAVADKGKT  60
APGGGKLVAE AMRKCAAPRS SRYHGVTRLK WSGKYEAHLW DNTSQVEGRK RKGKHGSYVT  120
EENAARAHDL AALKYWGITQ PTKLNFNISD YAKEIEIMKS MNQDEFVAYI RRQSSCFSRG  180
TSSYRGVTRR KDGKWQARIG RIGESRDTKD IYLGTFETEV EAAEAYDLAA IQLRGVHAVT  240
NFDISNYSEE GLKKLEGSSE VVNLEDQSEV TKLAVTNLDI SKHCEDGLKK LDGASQVVNL  300
EGQSEVTKLS VTNFDISNCC EDGLKKLEGS SEVANLEDQS EVTKLAGQ
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0089260.0BT008926.1 Triticum aestivum clone wde1f.pk001.h1:fis, full insert mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020150541.10.0AP2-like ethylene-responsive transcription factor AIL1
SwissprotQ1PFE15e-65AIL1_ARATH; AP2-like ethylene-responsive transcription factor AIL1
TrEMBLM8B2H70.0M8B2H7_AEGTA; AP2-like ethylene-responsive transcription factor PLT2
STRINGEMT109470.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP78643548
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72570.11e-67AP2 family protein
Publications ? help Back to Top
  1. Todd J,Post-Beittenmiller D,Jaworski JG
    KCS1 encodes a fatty acid elongase 3-ketoacyl-CoA synthase affecting wax biosynthesis in Arabidopsis thaliana.
    Plant J., 1999. 17(2): p. 119-30
    [PMID:10074711]