PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EMT10193 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family | bZIP | ||||||||
Protein Properties | Length: 196aa MW: 21351.7 Da PI: 10.8153 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 48 | 2.7e-15 | 100 | 147 | 4 | 51 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 + r+rr++kNRe+A rsR+RK+a++ eLe + ++L eN++L+k+ + EMT10193 100 VDRQRRMIKNRESAARSRARKQAYTNELEMELAQLRRENQMLIKREQD 147 679***************************************998655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 6.7E-9 | 97 | 161 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.415 | 99 | 151 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.7E-13 | 102 | 150 | No hit | No description |
SuperFamily | SSF57959 | 5.31E-11 | 102 | 151 | No hit | No description |
CDD | cd14707 | 8.61E-19 | 102 | 143 | No hit | No description |
Pfam | PF00170 | 5.2E-13 | 102 | 151 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 104 | 119 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 196 aa Download sequence Send to blast |
MSLPSTPAAL QSYHIRSPAA AVYPQDYLAG PVPLRRGHPY TALTLSSSVQ FTFQGGGSGS 60 GTPSGSSSCS DYPFGFPSAS GANSSNNNSK RVQVDAPAAV DRQRRMIKNR ESAARSRARK 120 QAYTNELEME LAQLRRENQM LIKREQDFIK ERSATAVVLP DCRSSSSNGG GRSRSNRSTL 180 HFELEQRQRC RSAPAP |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK375836 | 1e-152 | AK375836.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3107H21. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020164874.1 | 2e-96 | protein FD-like | ||||
TrEMBL | A0A3B6JQY5 | 1e-140 | A0A3B6JQY5_WHEAT; Uncharacterized protein | ||||
STRING | EMT10193 | 1e-141 | (Aegilops tauschii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP14602 | 10 | 20 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35900.1 | 1e-15 | bZIP family protein |