PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EMT10166 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family | WRKY | ||||||||
Protein Properties | Length: 131aa MW: 14524.5 Da PI: 9.6933 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 95.8 | 3e-30 | 59 | 117 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D y+WrKYGqK++kgs++pr+YYrC+s +Cp++k+ver++ d ++++tYe++Hnh EMT10166 59 SDSYSWRKYGQKPIKGSPHPRGYYRCSSIkDCPARKHVERCRGDAGMLIVTYENDHNHA 117 69************************9988****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF10533 | 2.6E-14 | 14 | 56 | IPR018872 | Zn-cluster domain |
Gene3D | G3DSA:2.20.25.80 | 1.6E-33 | 47 | 119 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 30.274 | 53 | 119 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 3.27E-27 | 56 | 119 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.9E-35 | 58 | 118 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.3E-25 | 60 | 116 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 131 aa Download sequence Send to blast |
MSSQLISMSE TSACAPASRK AAHKADDDGK CHCPKKKKPR EKRVVRMPAV SDKVADIPSD 60 SYSWRKYGQK PIKGSPHPRG YYRCSSIKDC PARKHVERCR GDAGMLIVTY ENDHNHAQPL 120 DLATLTANSE A |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 4e-22 | 46 | 119 | 2 | 74 | WRKY transcription factor 1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By salicylic acid and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK370043 | 0.0 | AK370043.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2104B06. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020156284.1 | 1e-91 | probable WRKY transcription factor 15 | ||||
Swissprot | Q9STX0 | 4e-48 | WRKY7_ARATH; Probable WRKY transcription factor 7 | ||||
TrEMBL | A0A453M3F8 | 3e-90 | A0A453M3F8_AEGTS; Uncharacterized protein | ||||
TrEMBL | M8B848 | 7e-92 | M8B848_AEGTA; Putative WRKY transcription factor 7 | ||||
STRING | EMT10166 | 1e-92 | (Aegilops tauschii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP12705 | 30 | 36 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24240.1 | 5e-43 | WRKY DNA-binding protein 7 |