PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT09799
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family bHLH
Protein Properties Length: 286aa    MW: 30113.6 Da    PI: 5.5977
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT09799genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.34.9e-07201242955
               HHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
       HLH   9 ErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                + RR+ri +++  L+el+P+ +      K++ +++L kA+ Y+k +q
  EMT09799 201 AKTRRERIGERLRVLQELVPNgN------KVDMVTMLDKAITYVKFMQ 242
               589******************55......****************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.07E-10192245No hitNo description
PROSITE profilePS5088814.119192241IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.8E-10193250IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.83E-12193254IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.1E-8198247IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    Send to blast
MALVGQPATF CYDGFVGDGV PAFMDAGGVL GFGYGYDHHS HLLEEECLLG GHAHAWELPT  60
GNLGAEAPGS VNAFGSHDLG WTSPAGRMSS SSSVLTFDSP GEDKCAAAAW MDAADQLSYS  120
PSTATAPAGS FSFEGCGGNG PPAASPSHKR PRARAQAQQG TEQESTTLPK KQCGGDRKSA  180
VKPIKTSAAT TSAKDPQSDA AKTRRERIGE RLRVLQELVP NGNKVDMVTM LDKAITYVKF  240
MQLQLTVLET DAFWPAQGGE APEISQVKAA LDAIILSSSQ QPRQWS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020158740.10.0transcription factor bHLH69-like
TrEMBLA0A3B6THP50.0A0A3B6THP5_WHEAT; Uncharacterized protein
TrEMBLA0A453RGE50.0A0A453RGE5_AEGTS; Uncharacterized protein
TrEMBLM8BSM00.0M8BSM0_AEGTA; Putative transcription factor bHLH086
STRINGEMT097990.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP141238117
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G37800.18e-44RHD SIX-LIKE 1