PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT09593
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family HB-other
Protein Properties Length: 219aa    MW: 25644.8 Da    PI: 9.4185
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT09593genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.21.4e-1879132356
               --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
  Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
               + +++ +eq++eLe++F++ +yp+++ r+ L+++lg++ +qVk+WFqN+R   k
  EMT09593  79 NYHRLRREQIQELEAVFREIPYPDEKLRKSLSERLGMNAQQVKFWFQNHRSNSK 132
               4556789*******************************************9776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.1E-1657134IPR009057Homeodomain-like
SuperFamilySSF466893.55E-1567132IPR009057Homeodomain-like
PROSITE profilePS5007115.5874134IPR001356Homeobox domain
CDDcd000861.59E-1176132No hitNo description
SMARTSM003897.7E-1376138IPR001356Homeobox domain
PfamPF000465.7E-1679132IPR001356Homeobox domain
PROSITE patternPS000270109132IPR017970Homeobox, conserved site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    Send to blast
MDGEWPQYNS VVHNDLDPFM TSEHSHLLQH DHGDETYGRL LGATPNVGMI DNTNVVAGNQ  60
GNNNVKTYSE QRMETRRTNY HRLRREQIQE LEAVFREIPY PDEKLRKSLS ERLGMNAQQV  120
KFWFQNHRSN SKGKTQRRET TTLKLENQML KSDRQAIMSA MENSTCLKCR GAVVQTQDTS  180
ERQRLFKENM KLQEELRLAA THLKEGLQQN GMWPRLTRN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020167365.11e-158homeobox-leucine zipper protein HDG7-like
TrEMBLM8C3521e-164M8C352_AEGTA; Homeobox-leucine zipper protein ROC4
STRINGEMT095931e-164(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP16772512
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52170.14e-26homeodomain GLABROUS 7