PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT09587
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family NF-X1
Protein Properties Length: 766aa    MW: 82692.5 Da    PI: 7.9692
Description NF-X1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT09587genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-NF-X121.64.6e-072643118
  zf-NF-X1  1 CGkHkCqklCHeGpCppC 18
              CG+H Cq  CH+GpC++C
  EMT09587 26 CGNHACQDVCHPGPCGEC 43
              ****************** PP
2zf-NF-X122.32.9e-0784101118
  zf-NF-X1   1 CGkHkCqklCHeGpCppC 18 
               CG H+C+ +CHeG+CppC
  EMT09587  84 CGVHRCKVTCHEGECPPC 101
               ****************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd060085.63E-91659No hitNo description
SMARTSM004382.0E-42645IPR000967Zinc finger, NF-X1-type
PfamPF014224.8E-52643IPR000967Zinc finger, NF-X1-type
CDDcd060081.65E-1374122No hitNo description
SMARTSM004381.3E-484103IPR000967Zinc finger, NF-X1-type
PfamPF014223.9E-684101IPR000967Zinc finger, NF-X1-type
CDDcd060087.51E-8169221No hitNo description
SMARTSM004380.0043179198IPR000967Zinc finger, NF-X1-type
PfamPF014220.035179197IPR000967Zinc finger, NF-X1-type
SMARTSM004380.49236254IPR000967Zinc finger, NF-X1-type
PfamPF0142291236252IPR000967Zinc finger, NF-X1-type
SMARTSM004380.027289324IPR000967Zinc finger, NF-X1-type
PfamPF014220.0061289305IPR000967Zinc finger, NF-X1-type
CDDcd060081.39E-4322373No hitNo description
PfamPF014222.7326352IPR000967Zinc finger, NF-X1-type
SMARTSM004384.1333354IPR000967Zinc finger, NF-X1-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009642Biological Processresponse to light intensity
GO:0009651Biological Processresponse to salt stress
GO:0009697Biological Processsalicylic acid biosynthetic process
GO:0010188Biological Processresponse to microbial phytotoxin
GO:0010310Biological Processregulation of hydrogen peroxide metabolic process
GO:0042742Biological Processdefense response to bacterium
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 766 aa     Download sequence    Send to blast
MVLKGKLSDK DGVFSCSEVC GHNLACGNHA CQDVCHPGPC GECELVPGKV TTCHCGKTRL  60
QEKRASCLDP IPTCDKVCDK RLPCGVHRCK VTCHEGECPP CLVRVEQRCR CGSSGQMVEC  120
YKVLKEEFRC NKPCGRKKNC GRHRCSECCC PLSKPFAQHQ GDSMDPHFCQ IPCGKKLRCG  180
QHGCQHLCHS GHCDPCRETI FHDLTCACGR TSIPPPQPCG TPTPSCPHQC MVPQPCGHPA  240
SHQCHFGDCP PCVVPVTREC VGGHVMLRNI PCGSKDIRCN QPCGKNRQCG LHACARTCHP  300
APCDPPPANG EASSSSGGRV SCGQLCGVPR RECKHTCNAP CHPSSPCPDV RCEHRVTITC  360
SCGRITTAVP CSAGGAYNGD SAFDISVMQQ LPMPLQPVES NGKRVPLGQR KLCCDEECAK  420
MERKRVLAEA FDITPPNLDA LHFGENSNAS DLLSDLFRRE PKWVLAIEER CKFLVLGKTK  480
GNSSSNMKFH VFCHMMKDKR DAIRLIADRW KLSVQAVGWE PKRFITVHVT PKSKVPARVL  540
GSKPGVPVSA SHPYFDPMVD MDPRLVVAML DLPRDADVSS LVLRFGGECE LVWLNDKNAA  600
AVFSDPARAA TALRRLDYGS AYQGAAMFCP SSITQASVSS NVWVGAQRDG GLAAKSSANP  660
WKASQSEPDP SGDWTVLSHA SGSVWKRGDT PAQVMGSSNR WNALESDAAT SSGPTDKRKP  720
PLRTETGSSS SAPRVGAGSS AAPSAGQSVS KLQPDVEVED WEESCE
Functional Description ? help Back to Top
Source Description
UniProtMediates E2-dependent ubiquitination (By similarity). Confers resistance to osmotic stress such as high salinity. Promotes H(2)O(2) production. Negative regulator of some defense-related genes via an salicylic acid (SA)-dependent signaling pathway. Confers susceptibility to the compatible phytopathogen Pseudomonas syringae pv. tomato strain DC3000 (Pst DC3000). Mediates resistance to type A trichothecenes (phytotoxins produced by phytopathogenic fungi). {ECO:0000250, ECO:0000269|PubMed:16905136, ECO:0000269|PubMed:18069941, ECO:0000269|PubMed:19704430}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By brassinosteroids, osmotic stress and high salinity. Accumulates in response to SA, ethylene, methyl jasmonate (MeJA), flagellin (e.g. flg22), and type A trichothecenes such as T-2 toxin and diacetoxyscirpenol (DAS), but not in response to type B trichothecenes such as deoxynivalenol (DON). {ECO:0000269|PubMed:16905136, ECO:0000269|PubMed:18069941, ECO:0000269|PubMed:19704430}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3605820.0AK360582.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1121G13.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020150167.10.0NF-X1-type zinc finger protein NFXL1-like
RefseqXP_020150168.10.0NF-X1-type zinc finger protein NFXL1-like
SwissprotQ9SY590.0NFXL1_ARATH; NF-X1-type zinc finger protein NFXL1
TrEMBLM8AYN00.0M8AYN0_AEGTA; Transcriptional repressor NF-X1
STRINGEMT095870.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP61303543
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10170.10.0NF-X-like 1