 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
EMT09079 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
|
| Family |
C2H2 |
| Protein Properties |
Length: 296aa MW: 31871.7 Da PI: 4.5173 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| EMT09079 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 13.6 | 0.0002 | 272 | 293 | 3 | 23 |
ETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 3 CpdCgksFsrksnLkrHirt.H 23
C+ C+k+F++ L +H + H
EMT09079 272 CKSCSKTFNSEGALASHSKAkH 293
*****************88767 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 296 aa
Download sequence Send
to blast |
MEFWGLEVKP NQSVKVSPDD EHFLHLSQGA LGEVKKDDKA TMFVKIGDQK LAIGTLSTDK 60
FPQIQFDLVF EKEFELSHNS KTSSVFFSGY KDESEEEEEE KIIPALTKEN GKPEAKEQKK 120
QVKIDTAAPS KSKAAAKDVG KSKKDDDSDD DDDSDEDDSE DDSGDDGALI PMEDDSDDSE 180
DGDDSSDDSE DSSDEEEEET PKKPETGKKR AAGSVLKTPV TDKKAKIATP SGQKTGDKKG 240
AVHVATPHPA KKAGKTPATS EKSPKSGGSV ACKSCSKTFN SEGALASHSK AKHEAK
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Mediates the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events (By similarity). {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | DQ656602 | 0.0 | DQ656602.1 Triticum aestivum histone deacetylase HDAC2 mRNA, complete cds. |
